setup.py

#!/usr/bin/env python

import os
import sys
import time

# Install setuptools if it isn't available:
try:
 import setuptools
except ImportError:
 from ez_setup import use_setuptools
 use_setuptools()

from setuptools import setup, find_packages, Extension
from distutils.command.install import INSTALL_SCHEMES
from distutils.sysconfig import get_python_version

# This is overwritten by Cython.Distutils.build_ext during package installation:
from distutils.command import build_ext

# This enables the installation of __init__.py files in
# namespace packages:
for scheme in INSTALL_SCHEMES.values():
 scheme['data'] = scheme['platlib']

NAME = 'bionet.ted'
VERSION = '0.7.1'
AUTHOR = 'Lev Givon'
AUTHOR_EMAIL = 'lev@columbia.edu'
URL = 'https://github.com/bionet/ted.python/'
MAINTAINER = 'Lev Givon'
MAINTAINER_EMAIL = 'lev@columbia.edu'
DESCRIPTION = 'Time Encoding and Decoding Toolkit'
DOWNLOAD_URL = URL
LICENSE = 'BSD'
CLASSIFIERS = [
 'Development Status :: 4 - Beta',
 'Intended Audience :: Developers',
 'Intended Audience :: Science/Research',
 'License :: OSI Approved :: BSD License',
 'Operating System :: OS Independent',
 'Programming Language :: Python',
 'Topic :: Scientific/Engineering',
 'Topic :: Software Development']

metadata = dict(name = NAME,
 version = VERSION,
 author = AUTHOR,
 author_email = AUTHOR_EMAIL,
 url = URL,
 maintainer = MAINTAINER,
 maintainer_email = MAINTAINER_EMAIL,
 description = DESCRIPTION,
 license = LICENSE,
 classifiers = CLASSIFIERS,
 packages = find_packages(),
 data_files = [('bionet', ['bionet/__init__.py'])],
 namespace_packages = ['bionet'],
 install_requires = ['cython >= 0.20.0',
 'numpy >= 1.2.0',
 'scipy >= 0.7.0'],
 extras_require = dict(
 matplotlib = 'matplotlib >= 0.98',
 opencv = 'opencv >= 2.1.0',
 tables = 'tables >= 2.1.1',
 sphinx = 'sphinx >= 1.3',
 sphinx_rtd_theme = 'sphinx_rtd_theme >= 0.1.6'))

# Don't attempt to import numpy when it isn't actually needed; this enables pip
# to install numpy before bottleneck:
ext_modules = []
if not(len(sys.argv) >= 2 and ('--help' in sys.argv[1:] or \
 sys.argv[1] in ('--help-commands', 'egg_info', '--version', 'clean'))):

 # Needed to build pyx files:
 try:
 from Cython.Distutils import build_ext
 except:
 pass
 else:
 if sys.platform in ['linux2', 'darwin']:

 # Need numpy include files to compile BPA extension:
 import numpy as np
 ext_name = 'bionet.ted.bpa_cython_' + sys.platform
 ext_modules = [Extension(ext_name,
 ['bionet/ted/bpa_cython.pyx'],
 [np.get_include()],
 libraries=['python' + get_python_version()])]

 metadata['ext_modules'] = ext_modules
 metadata['cmdclass'] = {'build_ext': build_ext}
if __name__ == '__main__':
 if os.path.exists('MANIFEST'):
 os.remove('MANIFEST')

 setup(**metadata)