Pipeline

[pre-commit.ci] pre-commit autoupdate (#201) #508

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[pre-commit.ci] pre-commit autoupdate (#201)

[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push August 3, 2026 18:37
@jan-janssenjan-janssen
pushed f9cee7f
main
StatusSuccess
Total duration 33m 32s
Artifacts –

pipeline.yml

on: push
black
14s
black
pip_check
52s
pip_check
nfdi4ing
8m 9s
nfdi4ing
quantumespresso
33m 26s
quantumespresso
arithmetic
2m 43s
arithmetic
documentation
41s
documentation
coverage
1m 19s
coverage
Matrix: unittest_matrix
mypy
11s
mypy
Fit to window
Zoom out
Zoom in

Annotations

11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.11/site-packages/galaxy/__init__.py - lib/python3.11/site-packages/galaxy/py.typed
unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

Skip to content
 Pipeline

[pre-commit.ci] pre-commit autoupdate (#201)
#508
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[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed


, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
 Pipeline

[pre-commit.ci] pre-commit autoupdate (#201)
#508
Sign in to view logs

[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed


, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
 Pipeline

[pre-commit.ci] pre-commit autoupdate (#201)
#508
Sign in to view logs

[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed


, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

Skip to content
 Pipeline

[pre-commit.ci] pre-commit autoupdate (#201)
#508
Sign in to view logs

[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed


, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
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[pre-commit.ci] pre-commit autoupdate (#201)
#508
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[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed


, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
 Pipeline

[pre-commit.ci] pre-commit autoupdate (#201)
#508
Sign in to view logs

[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed


, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
 Pipeline

[pre-commit.ci] pre-commit autoupdate (#201)
#508
Sign in to view logs

[pre-commit.ci] pre-commit autoupdate (#201)


[pre-commit.ci] pre-commit autoupdate (#201) #508

Triggered via push
August 3, 2026 18:37
@jan-janssenjan-janssen
pushed
f9cee7f

main
StatusSuccess
Total duration
33m 32s

Artifacts
–

pipeline.yml
on: push

black


14s

black

pip_check


52s

pip_check

nfdi4ing


8m 9s

nfdi4ing

quantumespresso


33m 26s

quantumespresso

arithmetic


2m 43s

arithmetic

documentation


41s

documentation

coverage


1m 19s

coverage

Matrix: unittest_matrix


mypy


11s

mypy
Fit to window
Zoom out
Zoom in
Annotations
11 warnings
black
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
mypy
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, actions/setup-python@v5. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pip_check
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed

unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

coverage
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
coverage
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

arithmetic
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

nfdi4ing
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed

quantumespresso
warning libmamba [galaxy-util-26.0.1-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed