diff --git a/content/blog/2026-gget-joins-scverse.md b/content/blog/2026-gget-joins-scverse.md index 1c6ca7e..c867c5a 100644 --- a/content/blog/2026-gget-joins-scverse.md +++ b/content/blog/2026-gget-joins-scverse.md @@ -9,7 +9,7 @@ draft = false Querying genomic reference databases is something every bioinformatician does constantly, and doing it well has historically required juggling a patchwork of APIs, file formats, and web interfaces. [gget](https://github.com/scverse/gget) was built to fix that, and is now officially part of the scverse ecosystem. -gget x scverse Overview. +gget x scverse Overview. ## What is gget? diff --git a/static/img/blog/gget_x_scverse_overview.svg b/static/img/blog/gget_x_scverse_overview.svg new file mode 100644 index 0000000..f0341a9 --- /dev/null +++ b/static/img/blog/gget_x_scverse_overview.svg @@ -0,0 +1,244 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + decoupler + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + gget + query layer + + + + + + + + + 20+ REFERENCE DATABASES + + GENES & ANNOTATION + Ensembl + NCBI + UCSC + + PROTEINS & STRUCTURE + UniProt + AlphaFold + + EXPRESSION & FUNCTION + CellxGene + ARCHS4 + Enrichr + Open Targets + COSMIC + & more + + + + + + + results return as AnnData / DataFrames + \ No newline at end of file diff --git a/static/img/blog/gget_x_scverse_overview.webp b/static/img/blog/gget_x_scverse_overview.webp deleted file mode 100644 index 9d18bb9..0000000 Binary files a/static/img/blog/gget_x_scverse_overview.webp and /dev/null differ