This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Skip to content
This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content
This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content
This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content
This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content
This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content
This repository was archived by the owner on Jan 27, 2022. It is now read-only.

Latest commit

History

History

README.md

Stencila Schema for Python

Build StatusCode coverageCode stylePyPIDocs

This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
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README.md

Stencila Schema for Python

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This package provides Python bindings for the Stencila Schema for executable documents. It is primarily aimed at Python developers wanting to programmatically generate, or modify, executable documents. For example, it is used in pyla, a Stencila plugin for Python.

Install

pip3installstencila-schema

Use

This packages exports a Python class for each type of document node in the Stencila Schema e.g. Article, Paragraph, CodeChunk.

For type safety, type annotations are places on attributes and parameters of the __init__ method. e.g.

classCodeExpression(CodeFragment):
"""An expression defined in programming language source code."""errors: Optional[Array["CodeError"]] =None"""Errors when compiling or executing the chunk."""output: Optional["Node"] =None"""The value of the expression when it was last evaluated."""

The __init__ method of each class has as parameters the attributes of the class (including those that are inherited) with required attributes first (alphabetically where there are more than one), followed by optional attributes (also alphabetically) e.g. for CodeExpression:

def__init__(
self,
text: str,
errors: Optional[Array["CodeError"]] =None,
format: Optional[str] =None,
id: Optional[str] =None,
meta: Optional[Dict[str, Any]] =None,
output: Optional["Node"] =None,
programmingLanguage: Optional[str] =None
)

It is recommended to use keyword arguments when calling constructors as it substantially reduces the likelihood that your code will break if you get the order wrong or if there are changes in the attributes of classes (and thus their order in __init__ parameters) in later versions e.g.

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
title="My first executable document",
authors=[Person(givenNames=["Jane"], familyNames=["Doe"])],
content=[
Paragraph(
content=[
"Two times two: ",
CodeExpression(programmingLanguage="python", text="2 * 2"),
]
)
],
)
print(article.authors[0].givenNames)
# Jane

In contrast, the following code is more concise, but is broken because, although it provides all required arguments, it gets the order wrong:

fromstencila.schema.typesimportArticle, CodeExpression, Paragraph, Personarticle=Article(
"My first executable document",
[Person(["Jane"], ["Doe"])],
[Paragraph(["Two times two: ", CodeExpression("2 * 2", "python"),])],
)
print(article.authors[0].address)
# Janeprint(article.authors[0].givenNames)
# None

To support conversion of schema nodes to/from JSON, json.py defines encode and decode functions. e.g.

fromstencila.schema.typesimportHeadingfromstencila.schema.jsonimportencode, decodeheading=Heading(content=["Heading Text"], depth=2)
#<stencila.schema.types.Heading object at 0x7f2d038a3748>json=encode(heading)
print(json)
#{# "type": "Heading",# "content": [# "Heading Text"# ],# "depth": 2#}decode(json)
#<stencila.schema.types.Heading object at 0x7fda7bbdd780>