4DNucleome

PartSeg Public

Tool for segmentation in bioimaging

Python 37BSD-3-Clause 10 9 13 Updated Aug 22, 2026

PartSegCore-compiled-backend Public

Jupyter Notebook 1BSD-3-Clause 0 2 1 Updated Aug 21, 2026

PartSeg-smfish Public

PartSeg and napari plugin for smfish data

Python 1BSD-3-Clause 0 1 1 Updated Jun 12, 2026

smfish-PartSeg Public

Python 0 0 0 0 Updated Oct 20, 2022

PartSeg_cellpose Public

Cellpose plugin for PartSeg

Python 0 0 0 0 Updated Oct 4, 2021

big-fish Public Forked from fish-quant/big-fish

Toolbox for the analysis of smFISH images.

Python 0BSD-3-Clause 25 0 0 Updated Sep 6, 2021

tad_compare Public

Compare different sets of TADs inferred from Hi-C data (or other 3C technique) using different methods.

Python 1 2 1 1 Updated Jun 6, 2021

PartSegData Public

Data for PartSeg

Python 0BSD-3-Clause 0 0 0 Updated Jan 26, 2021

md_soft Public

Polymer modelling engine

Python 0 0 0 0 Updated Nov 3, 2020

PartSeg_stardist Public

stardist plugin for partseg

Python 0 0 0 0 Updated Jun 20, 2020

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