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APR-VolumeRenderer

Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.

How to download and build

  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git
  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true
  • run app
./run.sh <your APR file>

Current branches

master

Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.

openmpEnabled

Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file: LibAPR-java-wrapper/native/cppbuild.sh

Output

skull and head images

Contact us

If anything is not working as you think it should, or would like it to, please get in touch with us!!!

Join the chat at https://gitter.im/LibAPR

About

Adaptive Particle Representation (APR) volume renderer based on jogl-minimal

Topics

adaptiveparticlerepresentationaprviewervolume-rendering

Resources

Readme
Activity
Custom properties

Stars

0 stars

Watchers

2 watching

Forks

0 forks
Report repository

Releases

Packages

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
BranchesTags
Repository files navigation
APR-VolumeRenderer
Viewer app that utilize jogl-minimal and LibAPR-java-wrapper to show Adaptive Particle Representation (APR) files. Thanks to reconstruction 'on the fly' it allows to open bigger files that memory available on the machine.
How to download and build
  • clone repository
git clone --recurse https://github.com/AdaptiveParticles/APR-VolumeRenderer.git

  • build java app
cd APR-VolumeRenderer
mvn pakcage -Dmaven.test.skip=true -Dmaven.javadoc.skip=true

  • run app
./run.sh <your APR file>

Current branches
master
Utilizing single-threaded version of LibAPR java wrapper. Using default available compiler.
openmpEnabled
Using OpenMP version of LibAPR java wrapper. Currently supporting llvm on MacOS, if you need to use different compiler please update CC/CXX/LDFLAGS/CPPFLAGS in submodule file:
LibAPR-java-wrapper/native/cppbuild.sh
Output
skull and head images
Contact us
If anything is not working as you think it should, or would like it to, please get in touch with us!!!
Join the chat at https://gitter.im/LibAPR
About
Adaptive Particle Representation (APR) volume renderer based on jogl-minimal
Topics
adaptiveparticlerepresentationaprviewervolume-rendering
Resources
Readme
Activity
Custom properties
Stars
0 stars
Watchers
2 watching
Forks
0 forks
Report repository
Releases
Packages
Contributors
Languages