Bimber Lab

A collection of public LabKey modules developed by the Bimber Lab

A collection of command line tools for working with sequencing data

This holds npm packages designed to support DISCVR web applications

An R package designed to demultiplex cell hashing data

The Rhesus Immune Reference Atlas: multi-tissue scRNA-seq atlas and code for cell type/state classification

nimble — execute lightweight, flexible alignments on custom reference libraries

Contains helper functions to append nimble data to Seurat objects

nimble-aligner is the backend for nimble, a tool that executes lightweight, flexible alignments to generate supplemental alignment data

Bimber Lab Site