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1. fiji-pluginsfiji-pluginsPublic

   Front-end Fiji plugins that make accessible the CTC measures.

   Java 1

2. java-ctcmetricsjava-ctcmetricsPublic

   Java implementation of measures for quantitative evaluation of biomedical tracking in general.

   Java 2 1

3. 2021-edition-available-colabs2021-edition-available-colabsPublic

   Colab Notebooks implementing training and inference for the methods of several contestants participating in the 2021 CTC edition, in order to fulfill the reusability criteria

   Jupyter Notebook 11 1

4. py-ctcmetricspy-ctcmetricsPublic

   Cell Tracking metrics and tools for the CellTrackingChallenge as described in 'CHOTA: A Higher Order Accuracy Metric for Cell Tracking'

   Python 31 6

5. label-fusion-nglabel-fusion-ngPublic

   Generalized Fiji Tool for Automatic Fusion of Segmentation and Tracking Labels

   Java

6. mastodon-ctcmastodon-ctcPublic

   Forked from mastodon-sc/mastodon-ctc

   Mastodon plugins to import from and export to (not only) the CellTrackingChallenge format

   Java