Clinical Genomics

Pinned Loading

1. scoutscoutPublic

   VCF visualization interface

   HTML 179 51

2. BALSAMICBALSAMICPublic

   Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer

   Python 60 15

3. rarediseaserarediseasePublic

   Forked from nf-core/raredisease

   CG's rare disease pipeline in next flow, see the main repo here 👇

   Nextflow 6 2

4. microSALTmicroSALTPublic

   Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.

   Python 3 3

5. MUTANTMUTANTPublic

   Microbial Utility Toolbox And wrapper for data traNsmission and Transformation

   Python 1

6. oncorefineroncorefinerPublic

   Repo for secondary layer of WGS cancer analyses

   Nextflow 1 1