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1. LongAGELongAGEPublic

   LongAGE: a memory-efficient implementation of Alignment with Gap Excision (AGE)

   C++ 6 1

2. Indel-AnalysisIndel-AnalysisPublic

   Analysis of optimal alignments unfolds bias in existing variant profiles (BMC Bioinformatics 2016)

   Python

3. Unknown-Bacteria-HunterUnknown-Bacteria-HunterPublic

   Using 16S rRNA Genes as Markers to Detect Unknown Bacteria in Microbial Communities (BMC Bioinformatics 2017)

   Python

4. abyzovlab/CNVpytorabyzovlab/CNVpytorPublic

   a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads

   Python 217 30

5. stjude/SVIndelGenotyperstjude/SVIndelGenotyperPublic

   Analysis of error profiles of Indels and structural variants in deep sequencing data

   Python 1