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@DReichLab

David Reich Lab

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  1. AdmixTools AdmixToolsPublic

    Tools test whether admixture occurred and more

    C 232 76

  2. EIG EIGPublic

    Eigen tools by Nick Patterson and Alkes Price lab

    C 207 61

  3. ADNA-Tools ADNA-ToolsPublic

    This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.

    Java 30 5

  4. adna-workflow adna-workflowPublic

    Workflow for processing Illumina sequencing runs for ancient human DNA

    Python 28 7

  5. adna adnaPublic

    Processing WGS aDNA data using the ReichLab protocol

    C 13 3

  6. cTools cToolsPublic

    Tools for accessing SGDP lite data

    C 8 6

Repositories

Showing 10 of 13 repositories
  • waldo Public
    DReichLab/waldo's past year of commit activity
    Python 3 0 147 0 Updated Sep 3, 2026
  • ADNA-Tools Public

    This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.

    DReichLab/ADNA-Tools's past year of commit activity
    Java 30 5 1 0 Updated Aug 21, 2026
  • adaptive-pulldown Public

    Generate pseudo-haploid genotype data from low coverage ancient DNA reads

    DReichLab/adaptive-pulldown's past year of commit activity
    0 0 0 0 Updated Aug 3, 2026
  • EIG Public

    Eigen tools by Nick Patterson and Alkes Price lab

    DReichLab/EIG's past year of commit activity
    C 207 61 58 3 Updated Jul 20, 2026
  • AdmixTools Public

    Tools test whether admixture occurred and more

    DReichLab/AdmixTools's past year of commit activity
    C 232 76 62 0 Updated Jul 13, 2026
  • contamMix Public Forked from plfjohnson/contamMix

    Contamination estimation from mitochondrial ancient DNA

    DReichLab/contamMix's past year of commit activity
    C++ 0GPL-3.0 2 0 0 Updated Jul 8, 2025
  • cTools Public

    Tools for accessing SGDP lite data

    DReichLab/cTools's past year of commit activity
    C 8 6 0 1 Updated May 13, 2024
  • MutationRateCode Public

    by Mark Lipson

    DReichLab/MutationRateCode's past year of commit activity
    MATLAB 4 0 0 0 Updated Feb 7, 2022
  • refinedate01 Public
    DReichLab/refinedate01's past year of commit activity
    C 0 1 0 0 Updated Apr 14, 2021
  • adna-workflow Public

    Workflow for processing Illumina sequencing runs for ancient human DNA

    DReichLab/adna-workflow's past year of commit activity
    Python 28 7 9 0 Updated Oct 29, 2020
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