refactor(resources): one canonical layout, scoped bases, dedup schemas

[Datata1]

Implements plans/refactor/04-resource-layer-normalization.md:

• Canonical per-resource layout everywhere: operations.py / schemas.py / resources.py. Renamed domain+usage manager.py and envVars/git/ landscape/logs models.py to resources.py; git schema.py -> schemas.py; deleted the zero-byte landscape/resources.py placeholder
• envVars/ package renamed to env_vars/; the old camelCase import path remains as a deprecation shim module (warns, re-exports)
• Domain entity moves to domain/schemas.py alongside its base (matching Team/Workspace); TeamDomainManager lives in domain/resources.py; domain/init.py gains proper re-exports
• New TeamScopedResource / WorkspaceScopedResource bases in core/base.py replace six copy-pasted manager __init__s; managers expose team_id/workspace_id consistently
• EnvVar derives from CamelModel like every other schema (gains to_dict/to_json/to_yaml)
• PipelineStatusList is now an alias of ResourceList[PipelineStatus] instead of a reimplementation
• PaginatedResponse: refresh() hoisted from the two response subclasses, limit/offset are non-Optional with defaults (drops the repeated 'or 25' re-defaulting); single _clamp_page_size helper replaces four inline min(max(...)) clamps
• Deleted dead utils.dict_to_model_list

Only internal module paths moved; all public re-exports (top-level codesphere, package __init__s) are unchanged, plus the envVars shim.

[github-actions]

🛡️ Bandit Security Scan Results

✅ No security issues found by Bandit.

[github-actions]

Pytest Coverage Report

File	Stmts	Miss	Branch	BrPart	Cover	Missing
__init__.py	9	0	0	0	100%
client.py	40	0	6	0	100%
config.py	9	0	0	0	100%
exceptions.py	94	32	38	22	59%	25->30, 40–42, 53->58, 54->55, 55, 73->74, 74, 85–87, 101–104, 106–107, 148–151, 158–160, 196->197, 197–199, 204->205, 205, 206->207, 207, 210->211, 211, 214, 215->216, 216, 217->218, 218–219, 222
http_client.py	49	6	6	2	85%	42->exit, 52->exit, 87–88, 90–91, 96–97
utils.py	10	2	4	1	79%	9->10, 10–11
core
__init__.py	4	0	0	0	100%
base.py	55	0	2	0	100%
handler.py	59	3	18	0	96%	80–82
operations.py	15	0	0	0	100%
resources
__init__.py	0	0	0	0	100%
resources/metadata
__init__.py	3	0	0	0	100%
operations.py	6	0	0	0	100%
resources.py	13	0	0	0	100%
schemas.py	28	0	0	0	100%
resources/team
__init__.py	5	0	0	0	100%
operations.py	8	0	0	0	100%
resources.py	11	0	0	0	100%
schemas.py	27	0	0	0	100%
resources/team/domain
__init__.py	3	0	0	0	100%
operations.py	11	0	0	0	100%
resources.py	16	0	0	0	100%
schemas.py	55	5	0	0	91%	67, 69, 72, 75–76
resources/team/usage
__init__.py	3	0	0	0	100%
operations.py	4	0	0	0	100%
resources.py	43	2	8	2	92%	99->102, 102, 162->165, 165
schemas.py	70	7	6	5	84%	66->67, 67, 72–73, 76, 84–86
resources/workspace
__init__.py	5	0	0	0	100%
envVars.py	4	0	0	0	100%
operations.py	12	0	0	0	100%
resources.py	16	2	4	2	80%	13->14, 14, 19->20, 20
schemas.py	99	14	6	6	81%	100–101, 103–109, 115–116, 118, 142, 161
resources/workspace/env_vars
__init__.py	3	0	0	0	100%
operations.py	7	0	0	0	100%
resources.py	25	2	12	4	84%	28->30, 30–31, 33->exit
schemas.py	4	0	0	0	100%
resources/workspace/git
__init__.py	3	0	0	0	100%
operations.py	8	0	0	0	100%
resources.py	15	0	4	0	100%
schemas.py	4	0	0	0	100%
resources/workspace/landscape
__init__.py	3	0	0	0	100%
operations.py	12	0	0	0	100%
resources.py	94	7	36	8	88%	27->28, 28, 126->129, 132->135, 158->159, 159–160, 162->157, 165->166, 166, 170–172
schemas.py	290	29	10	4	89%	113–114, 117, 122–123, 126–127, 130, 135–137, 140–141, 144, 251, 258–259, 334–336, 338–340, 342–343, 458–459, 466–467
resources/workspace/logs
__init__.py	3	0	0	0	100%
operations.py	5	0	0	0	100%
resources.py	151	86	62	54	34%	41–42, 48, 50–52, 54, 57–58, 61, 64–65, 67–70, 72–73, 76–77, 79–80, 82–83, 85–87, 89–90, 92–96, 98–99, 101–103, 105–110, 123–124, 209–211, 220–222, 231–233, 243–252, 262–271, 281–290
schemas.py	19	0	0	0	100%
TOTAL	1432	197	222	110	81%

Test Execution Summary

Tests	Skipped	Failures	Errors	Time
279	0 💤	0 ❌	0 🔥	2.999s ⏱️

[github-actions]

Integration Test Results

63 tests 0 ✅ 10s ⏱️
1 suites 0 💤
1 files 24 ❌ 39 🔥

For more details on these failures and errors, see this check.

Results for commit 8c9f102.