Davis Laboratory

Spatial transcriptomics analyses and decoding in R

An R package for automatically screening cell type signature in specific tissue/organ/cancer.

Methods for label-free mass spectrometry proteomics

An R package for Scoring and Marker Selection Based on Modified TF-IDF

Querying cellular states and programs by learning representations of gene sets

Code to reproduce figures for scDECAF manuscript

An R/Bioconductor package that implements a single-sample molecular phenotyping approach

Scripts and notebooks to reproduce figures for the peptideprotonet manuscript