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@EichlerLab

Eichler Lab

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  1. pav pavPublic

    Phased assembly variant caller

    Python 142 10

  2. smrtsv2 smrtsv2Public

    Structural variant caller

    Python 54 6

  3. svpop svpopPublic

    Variant annotation and merging pipeline

    Python 44 8

  4. pacbio_variant_caller pacbio_variant_callerPublic archive

    SMRT-SV: Structural variant and indel caller for PacBio reads

    Python 28 15

  5. CDR-Finder CDR-FinderPublic

    Workflow to identify the centromere dip regions (CDR) from methyl BAMs

    Python 16 3

  6. vcf-flow vcf-flowPublic

    Forked from huddlej/tab-to-vcf

    Convert tab-delimited file into a VCF

    Python 8 2

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