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FlyBase

A Database of Drosophila Genes & Genomes

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We've verified that the organization FlyBase controls the domain:
- flybase.org
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https://flybase.org
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@FlyBase@mstdn.science
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drosophila-anatomy-developmental-ontologydrosophila-anatomy-developmental-ontologyPublic
The home of the Drosophila anatomy ontology
Jupyter Notebook 23 6
react-sequence-viewerreact-sequence-viewerPublic
A React wrapper around the BioJS sequence-viewer component
JavaScript 9 3
react-ontology-ribbonreact-ontology-ribbonPublic
A React component for generating a heatmap type display for GO slims.
JavaScript 7 4
bulkfile-scriptsbulkfile-scriptsPublic
Scripts useful for working with bulk FlyBase data locally.
Perl 3 5
flybase-controlled-vocabularyflybase-controlled-vocabularyPublic
The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)
Shell 10 6
chadochadoPublic
Chado related code for FlyBase
PLpgSQL 1

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Showing 10 of 55 repositories

alliance-linkml-flybase Public
Code for export of FlyBase data to the Alliance LinkML-based persistent store.
FlyBase/alliance-linkml-flybase's past year of commit activity
Python 0MIT 0 0 0 Updated Aug 7, 2026
drosophila-anatomy-developmental-ontology Public
The home of the Drosophila anatomy ontology
FlyBase/drosophila-anatomy-developmental-ontology's past year of commit activity
Jupyter Notebook 23CC-BY-4.0 6 14 0 Updated Aug 7, 2026
knowledge-graph Public
Versioned, evidence-grounded FlyBase knowledge graph data product, schema, documentation, and examples.
FlyBase/knowledge-graph's past year of commit activity
0MIT 0 0 0 Updated Aug 4, 2026
harvdev-peeves-parser Public
Stripped down peeves for testing ONLY. May be destroyed later. To run on tests to get idea of peeves messages.
FlyBase/harvdev-peeves-parser's past year of commit activity
Perl 0 0 0 0 Updated Jul 23, 2026
harvdev-bulk-reports Public
Generate bulk reports for FlyBase curators, users and collaborators.
FlyBase/harvdev-bulk-reports's past year of commit activity
Perl 0MIT 0 0 0 Updated Jul 21, 2026
FB_flag_migration Public
scripts and data to handle FlyBase flag data into alliance
FlyBase/FB_flag_migration's past year of commit activity
Perl 0 0 0 0 Updated Jul 14, 2026
flybase-controlled-vocabulary Public
The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)
FlyBase/flybase-controlled-vocabulary's past year of commit activity
Shell 10CC-BY-4.0 6 0 0 Updated Jul 10, 2026
drosophila-phenotype-ontology Public
The home of the Drosophila phenotype ontology
FlyBase/drosophila-phenotype-ontology's past year of commit activity
Makefile 5CC-BY-4.0 2 23 0 Updated Jul 10, 2026
drosophila-developmental-ontology Public
The home of the Drosophila developmental ontology, an ontology of Drosophila melanogaster developmental stages.
FlyBase/drosophila-developmental-ontology's past year of commit activity
Makefile 5CC-BY-4.0 0 0 0 Updated Jul 9, 2026
blast-db-configuration Public
Code for generating the Alliance BLAST DB configuration file
FlyBase/blast-db-configuration's past year of commit activity
Python 0MIT 0 0 0 Updated Jun 25, 2026

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