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  1. scAEDscAEDPublic

    We have developed the first active enhancer database at single-cell resolution for both normal and disease conditions, named the Single Cell Active Enhancer Database (scAED).

    Shell

  2. scATACseqscATACseqPublic

    Jupyter Notebook

  3. MetaDAVisMetaDAVisPublic

    MetaDAVis

    R

  4. SCARR-VisSCARR-VisPublic

    R

  5. Lncrna-frameworkLncrna-frameworkPublic

    Python 1

  6. scGRAMscGRAMPublic

    scGRAM — single-cell Genomic Regulatory Annotation Model: a multi-modal, multi-label deep-learning framework that fuses transcription-factor footprints with open-chromatin sequence context to annot…

    Python