Popular repositories Loading

1. LncScape LncScapePublic

   A Shiny tool for lncRNA discovery, dynamics scoring, TF–lncRNA interactions, and pathway analysis from scRNA-seq data.

   R 1

2. CellVista CellVistaPublic

   CellVista: A Shiny app for scRNA-seq QC, clustering, pseudotime, entropy, regulatory turbulence, and boundary sharpness analysis, enabling exploration of transcriptomic landscapes.

   R 1

3. DECODER-SC DECODER-SCPublic

   DECODER-SC is an R-based algorithm for quantifying TF–target regulatory discordance by measuring mismatches between transcription factor activity and target gene expression in single-cell RNA-seq d…

   R 1

4. USRSD USRSDPublic

   USRSD is an R-based framework for reconstructing instability landscapes and dynamical gene programs from snapshot single-cell RNA-seq data. It models cell-state transitions using graph-based dynami…

   R 1

5. EvoScore EvoScorePublic

   single-cell, transcriptomics, transcriptional adaptability, EPS, EvoScore, scRNA-seq, prognostic signature, drug sensitivity, tumor microenvironment, bioinformatics, genomics

   R