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@Health-Informatics-UoN

University of Nottingham Health Informatics

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University of Nottingham Centre for Health Informatics

We are transforming health research with cutting-edge digital technology and data science. Our work enables discoveries that improve people’s lives and enhance public health.

Tools

Federated Research Logo

Federated Research is driven to transform how researchers securely access and analyse data across multiple locations. Achieved by promoting independent organisations to work together through agreed-upon standards, protocols, principles, while keeping control over their own data, services, or platforms.

Federated Research RepoFederated Research Docs


Bunny Logo

Website

Bunny is an application for fetching Cohort Discovery queries and resolving them against an OMOP database.

MIT LicenseBunny RepoBunny ReleasesBunny TestsPythonBunny Docker ImagesBunny DocsBunny Roadmap

Relay Logo

Relay is an application for enabling federated networks in Cohort Discovery, that implements the GA4GH Beacon API.

MIT LicenseRelay RepoRelay ReleasesRelay Tests.NETRelay Docker ImagesRelay DocsRelay Roadmap


Carrot Logo

Carrot is an application stack for mapping and transforming health data to the OMOP common data model, in a secure way that enables collaboration and reusability.

Website

Carrot Mapper is a tool for mapping health data to the OMOP common data model, in a secure way enabling collaboration and reusability.

MIT LicenseCarrot Mapper RepoCarrot Mapper ReleasesCarrot Mapper TestsPythonCarrot Mapper ContainersCarrot Mapper DocsCarrot Mapper Roadmap

Carrot Transform is a tool for executing mappings to transform health data to the OMOP common data model.

MIT LicenseCarrot Transform RepoCarrot Transform ReleasesCarrot Transform TestsPythonCarrot Transform DocsCarrot Transform Roadmap



Lettuce Logo

Lettuce uses an LLM for efficient translation and transformation into OMOP vocabulary.

Website

MIT LicenseLettuce RepoLettuce ReleasesPythonLettuce Docs

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  1. carrotcarrotPublic

    Streamlined Data Transformation to OMOP

    MDX 9

  2. hutchhutchPublic

    Hutch is the home of Bunny and Relay documentation and samples for Federated Discovery.

    MDX 5 3

  3. carrot-mappercarrot-mapperPublic

    Streamlined Data Mapping to OMOP

    Python 24 6

  4. hutch-bunnyhutch-bunnyPublic

    A Cohort Discovery Task Resolver.

    Python 8 12

  5. lettucelettucePublic

    Python 16 3

  6. hutch-relayhutch-relayPublic

    A Federated Proxy for Cohort Discovery

    C# 2 1

Repositories

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