fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

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@italomacedo

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Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

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Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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@italomacedo@grahamegrieve
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

Conversation

@italomacedo

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Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

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Contributor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

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CollaboratorAuthor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

Copy link
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CollaboratorAuthor

Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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2 participants

@italomacedo@grahamegrieve
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

Conversation

@italomacedo

Copy link
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Collaborator

Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

Copy link
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Contributor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

Copy link
Copy Markdown
CollaboratorAuthor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

Copy link
Copy Markdown
CollaboratorAuthor

Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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Successfully merging this pull request may close these issues.

2 participants

@italomacedo@grahamegrieve
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

Conversation

@italomacedo

Copy link
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Collaborator

Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

Copy link
Copy Markdown
Contributor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

Copy link
Copy Markdown
CollaboratorAuthor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

Copy link
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Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

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@italomacedo

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Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

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Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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@italomacedo@grahamegrieve
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

Conversation

@italomacedo

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Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

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CollaboratorAuthor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

Copy link
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CollaboratorAuthor

Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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Successfully merging this pull request may close these issues.

2 participants

@italomacedo@grahamegrieve
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

Conversation

@italomacedo

Copy link
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Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

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Contributor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

@italomacedo

Copy link
Copy Markdown
CollaboratorAuthor

@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

Copy link
Copy Markdown
CollaboratorAuthor

Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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Successfully merging this pull request may close these issues.

2 participants

@italomacedo@grahamegrieve
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
Skip to content

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup - #266

Merged
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories
Aug 31, 2026
Merged

fix(ocl): auto-register factories for post-startup sources + expose concept extras in $lookup#266
grahamegrieve merged 3 commits into
mainfrom
fix/ocl-post-startup-factories

Conversation

@italomacedo

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Collaborator

Two OCL fixes, verified against the current main base (9 OCL test suites / 80 tests passing). Scoped entirely to tx/ocl/ plus tests.

1. Auto-register factories for OCL sources discovered post-startup

New OCL sources created after the server starts were silently falling back to FhirCodeSystemProvider, which reads the raw content field and returns contentMode() = 'not-present', causing ValueSet expansions to fail with "The code system definition has no content".

Root cause: the refresh cycle detected new sources via getCodeSystemChanges() and called addCodeSystem(), but never created an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found a factory and fell through to the raw CodeSystem.

Fix (entirely within tx/ocl/):

  • OCLSourceCodeSystemFactory stores the first i18n instance in a static field so discovery-time factory creation can reuse it.
  • New static createForDiscoveredSource(httpClient, meta) creates and auto-registers a factory for a newly detected source.
  • #scheduleRefresh now creates factories for entries in changes.added that don't yet have one.
  • New patchProviderForOCLFactorySync (in shared/patches.cjs) syncs any factory not yet in provider.codeSystemFactories, following the same pattern already used for the SearchWorker and ValueSetExpander patches.

2. Expose concept extras as properties in $lookup

Carry OCL concept extras through toConceptContext (non-empty plain objects only) and implement extendLookup on OCLSourceCodeSystemProvider to emit each entry as a FHIR property parameter with typed value[x] (boolean/integer/decimal/string; arrays and objects JSON-stringified). Honors the $lookup property filter per key.

🤖 Generated with Claude Code

italomacedoand others added 2 commits July 10, 2026 11:33
…artup
New OCL sources created after the server starts were silently falling
back to FhirCodeSystemProvider, which reads the raw 'content' field
and returns contentMode() = 'not-present', causing ValueSet expansions
to fail with "The code system definition has no content".
Root cause: the 60-second refresh cycle detected new sources via
getCodeSystemChanges() and called addCodeSystem(), but never created
an OCLSourceCodeSystemFactory — so getCodeSystemProvider() never found
a factory and fell through to the raw CodeSystem.
Fix (entirely within tx/ocl/):
- OCLSourceCodeSystemFactory stores the first i18n instance in a static
field (#sharedI18n) so discovery-time factory creation can reuse it
without requiring library.js to pass i18n again
- Added static createForDiscoveredSource(httpClient, meta) that creates
and auto-registers a factory for a newly detected source; factories
self-register in the static factoriesByKey map on construction
- #scheduleRefresh now calls createForDiscoveredSource for each entry
in changes.added that does not yet have a factory
- patchProviderForOCLFactorySync (new patch in shared/patches.cjs)
monkey-patches Provider.prototype.updateCodeSystemList to sync any
factory in factoriesByKey that is not yet in provider.codeSystemFactories,
following the same idiomatic pattern used for SearchWorker and
ValueSetExpander patches
No files outside tx/ocl/ were modified.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Carry OCL concept extras through toConceptContext (non-empty plain
objects only) and implement extendLookup on OCLSourceCodeSystemProvider
to emit each entry as a FHIR property parameter with typed value[x]
(boolean/integer/decimal/string; arrays and objects JSON-stringified).
Honors the $lookup property filter per key. Provider now extends
BaseCSServices for the _hasProp helper and is exported for tests.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@grahamegrieve

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

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@italomacedo one general issue with this PR: console.log/console.error - please use the module logger instead

Working on it

Replace all console.log/console.error calls across the OCL module with a
child logger from library/logger (Logger.getInstance().child({ module })),
per review feedback on PR #266.
- cs-ocl.cjs, background-queue.cjs, cache-utils.cjs -> module 'ocl'
- vs-ocl.cjs -> module 'ocl-vs' (preserves the former [OCL-ValueSet] split)
- drop the redundant [OCL]/[OCL-ValueSet] message prefixes (the child logger
now tags each line with {module})
- fetchAllPages in #fetchAllPages now receives the child logger with an empty
loggerPrefix instead of console
- getColdCacheAgeMs: drop the now-unused logPrefix parameter
No behavior change beyond log routing; all 80 OCL tests pass.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@italomacedo

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Good catch — done in cd8bb7b. I converted the whole OCL module to the module logger (Logger.getInstance().child({ module })), not just the new line: all 32 console.log/console.error calls across cs-ocl, vs-ocl, background-queue and cache-utils now go through it. Dropped the redundant [OCL]/[OCL-ValueSet] message prefixes since the child logger tags each line with the module. All 80 OCL tests still pass.

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ok

@grahamegrieve
grahamegrieve merged commit 4b57b2f into mainAug 31, 2026
8 of 9 checks passed
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@italomacedo@grahamegrieve