Jinmiao Chen's Lab

Python version of DISCO toolkit

Python 13 1 2 0 Updated Aug 5, 2026

Python 20MIT 3 0 0 Updated Jan 28, 2026

R 1 0 0 0 Updated Jul 16, 2025

SEDR Public

Python 72MIT 12 10 0 Updated Nov 6, 2024

FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis

R 22 5 2 0 Updated Oct 25, 2024

SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.

Python 93AGPL-3.0 13 39 0 Updated Jun 24, 2024

The tutorial is to show how to apply SpatialGlue to integrate spatial multi-omics data to decipher tissue heterogeneity.

Python 3 0 1 0 Updated Jun 22, 2024

Extended version of SpatialGlue for integration of spatial triplet modality data.

Python 6 1 0 0 Updated Jun 22, 2024

R 2 0 0 0 Updated May 3, 2024

scTM Public

scTM: A package for topic modelling in transcriptomics data

Python 28 4 12 0 Updated May 1, 2024

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