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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

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5 watching

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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

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Resources

Stars

28 stars

Watchers

5 watching

Forks

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, 'i'); if (__m === '*' || __re.test(location.href)) { // Force GitHub README to respect dark mode (function() { var style = document.createElement('style'); style.textContent = ' .markdown-body { color-scheme: dark light; } .markdown-body pre { background: #161b22 !important; } .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; } .markdown-body table th, .markdown-body table td { border-color: #30363d !important; } .markdown-body img { background: #0d1117; } .markdown-body blockquote { border-left-color: #8b949e; } .markdown-body hr { border-color: #30363d; } '; document.head.appendChild(style); })(); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

Watchers

5 watching

Forks

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Highlight search terms from Google/DuckDuckGo/Bing referrer (function() { var ref = document.referrer; var terms = []; if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) { var url = new URL(ref); var q = url.searchParams.get('q') || url.searchParams.get('p'); if (q) { terms = q.split(/\s+/).filter(function(t) { return t.length > 2; }); } } if (terms.length === 0) return; var style = document.createElement('style'); style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }'; document.head.appendChild(style); function highlight(node) { if (node.nodeType === 3) { // text node var text = node.textContent; var found = false; terms.forEach(function(term) { var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi'); if (regex.test(text)) { found = true; var frag = document.createDocumentFragment(); var parts = text.split(regex); parts.forEach(function(part, i) { if (i % 2 === 0) { frag.appendChild(document.createTextNode(part)); } else { var span = document.createElement('span'); span.className = 'userscript-highlight'; span.textContent = part; frag.appendChild(span); } }); node.parentNode.replaceChild(frag, node); } }); } else if (node.nodeType === 1 && node.childNodes) { // element var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT']; if (!skipTags.includes(node.tagName)) { Array.from(node.childNodes).forEach(highlight); } } } highlight(document.body); // Re-highlight on dynamic content var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1 || node.nodeType === 3) highlight(node); }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

Watchers

5 watching

Forks

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Strip utm_, fbclid, gclid, etc. from all links on page (function() { var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content', 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid', 'ref', 'ref_src', 'source', 'medium', 'campaign']; function cleanUrl(url) { try { var u = new URL(url, window.location.origin); var changed = false; trackingParams.forEach(function(p) { if (u.searchParams.has(p)) { u.searchParams.delete(p); changed = true; } }); return changed ? u.toString() : url; } catch (e) { return url; } } function cleanLinks() { document.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } cleanLinks(); var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1) { if (node.tagName === 'A') cleanLinks(); node.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

Watchers

5 watching

Forks

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Auto-enable theater mode on YouTube (function() { function tryTheater() { var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]'); if (btn && !btn.classList.contains('activated')) { btn.click(); } } // Try immediately tryTheater(); // Try after navigation (SPA) var lastUrl = location.href; setInterval(function() { if (location.href !== lastUrl) { lastUrl = location.href; setTimeout(tryTheater, 500); } }, 1000); // Also try on player load var observer = new MutationObserver(tryTheater); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

Watchers

5 watching

Forks

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Remove or un-stick sticky/fixed headers that block content (function() { function unstick() { document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) { if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') { el.style.position = 'static'; el.style.top = 'auto'; el.style.zIndex = 'auto'; } }); } unstick(); var observer = new MutationObserver(unstick); observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] }); })(); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

Watchers

5 watching

Forks

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Universal Dark Mode - works on any site (function() { var enabled = true; function applyDarkMode() { if (!enabled) return; // Create style element if it doesn't exist var style = document.getElementById('universal-dark-mode-style'); if (!style) { style = document.createElement('style'); style.id = 'universal-dark-mode-style'; document.head.appendChild(style); } // Dark mode CSS - inverts colors but preserves images/video style.textContent = ' /* Invert everything except media */ html { filter: invert(1) hue-rotate(180deg) !important; background: #1a1a2e !important; } /* Restore images, videos, iframes, canvas */ img, video, iframe, canvas, svg, picture, [style*="background-image"] { filter: invert(1) hue-rotate(180deg) !important; } /* Preserve specific elements that should not be inverted */ .no-dark-mode, .no-dark-mode *, [data-theme="light"], [data-theme="light"], .ace_editor, .ace_editor *, .CodeMirror, .CodeMirror *, .monaco-editor, .monaco-editor *, .markdown-body pre, .markdown-body pre *, .highlight, .highlight *, pre code, pre code * { filter: none !important; } /* Fix common UI elements */ .modal, .popup, .dropdown-menu, .tooltip, .popover { filter: invert(1) hue-rotate(180deg) !important; background: #2d2d44 !important; border-color: #444 !important; } /* Scrollbars */ ::-webkit-scrollbar { background: #1a1a2e !important; } ::-webkit-scrollbar-thumb { background: #444 !important; } ::-webkit-scrollbar-thumb:hover { background: #555 !important; } /* Selection */ ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; } ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; } '; } function removeDarkMode() { var style = document.getElementById('universal-dark-mode-style'); if (style) style.remove(); } // Toggle with Alt+Shift+D document.addEventListener('keydown', function(e) { if (e.altKey && e.shiftKey && e.key === 'D') { e.preventDefault(); enabled = !enabled; if (enabled) { applyDarkMode(); console.log('[Universal Dark Mode] Enabled'); } else { removeDarkMode(); console.log('[Universal Dark Mode] Disabled'); } } }); // Apply on load applyDarkMode(); // Re-apply on dynamic content var observer = new MutationObserver(function(mutations) { if (enabled && !document.getElementById('universal-dark-mode-style')) { applyDarkMode(); } }); observer.observe(document.head, { childList: true }); console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle'); })(); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
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ITK Point-of-Care Ultrasound (ITKPOCUS)

About

ITK Point-of-Care Ultrasound (ITKPOCUS) is an open source (Apache 2.0) collection of software libraries for the preprocessing and streaming of point-of-care ultrasound (POCUS) devices in order to support image processing and AI. It currently has levels of support for Clarius, Butterfly, Sonivate, Sonoque, and Interson probes.

A version of our automatic algorithm for optic nerve sheath diameter (ONSD) measurement (Moore et al. 2020) has been published here.

The ONSD estimation work is still active and updates will be pushed to this repository in the near future.

ITKPOCUS is developed by Kitware, Inc. in collaboration with Duke University. This effort was sponsored by the U.S. Government under Other Transactions Number W81XWH-15-9-0001/W81XWH-19-9-0015 (MTEC 19-08-MuLTI-0079).

Usage

See the individual device folders for additional documentation. Streaming APIs are dependent on the manufacturer's API (e.g. Android/Java for Clarius, MFC C++ for Sonivate, C++ for Interson). The toolkit wraps the native device APIs to the OpenIGTLink message protocol. The folder itkpocus contains the itkpocus Python library for preprocessing video files. Video files from the various manufacturers are converted into Insight Toolkit (ITK) itk.Image objects and file formats for image processing.

Roadmap

Always

  • Contributions for other device support

Q3-Q4 2021

2022

  • Automated optic nerve sheath measurement

Publications

Contact

For bugs/issues/questions about using ITKPOCUS, please submit an issue using the Github tracker. For questions about the project or future collaboration, contact Brad Moore and Stephen Aylward.

About

An open source library for streaming and preprocessing point-of-care ultrasound video.

Topics

Resources

Stars

28 stars

Watchers

5 watching

Forks

Releases

Packages

Used by

Contributors

Languages