This repository contains Literome dataset from a 2014 publication by Poon et al. titled "Literome: PubMed-scale genomic knowledge base in the cloud".
It contains 409170 claims about 150634 interactions extracted from 315226 publications.
The view of the dataset:
| PMID | Sentence | Theme | Cause | Regulation Type | Sentence.1 |
|---|---|---|---|---|---|
| 1000130 | 5 | 13:15:DBH | 1:2:DSP | Positive_regulation | 4 [DSP] 4 -LRB- 50 mg/kg i.p. -RRB- cuased a decrease in the <dopamine-beta-hydroxylase (DBH)> activity in the rat brain and heart . |
| 1000386 | 8 | 3:4:GCG | 17:18:INS | Positive_regulation | Therefore , while appears capable of stimulating ketogenesis andlipolysis , these effects are readily suppressed by [insulin] . |
| 100079 | 2 | 15:18:GH1 | 3:4:TRH | Positive_regulation | In ten , [TRH] , 500 microgram given intravenously , induced a rise in plasma <growth hormone (GH)> level , while in eight patients it induced a rise in plasma levels of FSH or LH or both . |
This dataset was used in Belikov et al. titled "Prediction of robust scientific facts from literature".