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Merged
labkey-adam merged 1 commit into from
Oct 2, 2024
Merged

Use WritablePropertyMap #148

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3 changes: 2 additions & 1 deletion genotyping/src/org/labkey/genotyping/GenotypingManager.java
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Original file line numberDiff line numberDiff line change
Expand Up@@ -21,6 +21,7 @@
import org.labkey.api.data.AtomicDatabaseInteger;
import org.labkey.api.data.Container;
import org.labkey.api.data.PropertyManager;
import org.labkey.api.data.PropertyManager.WritablePropertyMap;
import org.labkey.api.data.SQLFragment;
import org.labkey.api.data.SimpleFilter;
import org.labkey.api.data.SqlExecutor;
Expand DownExpand Up@@ -115,7 +116,7 @@ public String getDescription()

public void saveSettings(Container c, GenotypingFolderSettings settings)
{
PropertyManager.PropertyMap map = PropertyManager.getWritableProperties(c, FOLDER_CATEGORY, true);
WritablePropertyMap map = PropertyManager.getWritableProperties(c, FOLDER_CATEGORY, true);
map.put(Setting.ReferenceSequencesQuery.getKey(), settings.getSequencesQuery());
map.put(Setting.RunsQuery.getKey(), settings.getRunsQuery());
map.put(Setting.SamplesQuery.getKey(), settings.getSamplesQuery());
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7 changes: 4 additions & 3 deletions genotyping/src/org/labkey/genotyping/galaxy/GalaxyManager.java
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Expand Up@@ -16,10 +16,11 @@

package org.labkey.genotyping.galaxy;

import org.apache.logging.log4j.Logger;
import org.apache.logging.log4j.LogManager;
import org.apache.logging.log4j.Logger;
import org.labkey.api.data.Container;
import org.labkey.api.data.PropertyManager;
import org.labkey.api.data.PropertyManager.WritablePropertyMap;
import org.labkey.api.security.User;

import java.util.Map;
Expand DownExpand Up@@ -50,7 +51,7 @@ public static GalaxyManager get()

public void saveSettings(Container c, GalaxyFolderSettings settings)
{
PropertyManager.PropertyMap map = PropertyManager.getWritableProperties(c, FOLDER_CATEGORY, true);
WritablePropertyMap map = PropertyManager.getWritableProperties(c, FOLDER_CATEGORY, true);
map.put(GALAXY_URL, settings.getGalaxyURL());
map.save();
}
Expand All@@ -73,7 +74,7 @@ public String getGalaxyURL()

public void saveUserSettings(Container c, User user, GalaxyUserSettings userSettings)
{
PropertyManager.PropertyMap map = PropertyManager.getWritableProperties(user, c, USER_CATEGORY, true);
WritablePropertyMap map = PropertyManager.getWritableProperties(user, c, USER_CATEGORY, true);
map.put(GALAXY_KEY, userSettings.getGalaxyKey());
map.save();
}
Expand Down