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Return none not object array - #52

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Return none not object array#52
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return-none-not-object-array

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@gcapesgcapes commented Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.

Fixes the issue described here: hpcflow/matflow#432 (comment)

@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes requested a review from aplowman as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes changed the base branch from main to developDecember 4, 2025 11:58
@gcapesgcapes mentioned this pull request Dec 4, 2025
Closed
@gcapes
gcapes changed the base branch from develop to mainDecember 11, 2025 10:18
@gcapes
gcapes changed the base branch from main to developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes

gcapes commented Dec 11, 2025

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@aplowman
Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.

@gcapes

gcapes commented Jan 6, 2026

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@dkfellows Any ideas on how to get the final macos test of the os matrix running?

@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman

aplowman commented Jan 6, 2026

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Hopefully the above commit has done the trick.

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@gcapes

gcapes commented Jan 7, 2026•
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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷

@gcapesgcapes self-assigned this Jan 7, 2026
@aplowman
aplowman merged commit 5461c0a into developJan 13, 2026
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Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
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Return none not object array - #52
Merged
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
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return-none-not-object-array
Conversation
@gcapes
@gcapesgcapes
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Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes
requested a review
from aplowman
as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes
changed the base branch from
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developDecember 4, 2025 11:58
@gcapesgcapes
mentioned this pull request
Dec 4, 2025

Closed

@gcapes
gcapes
changed the base branch from
develop
to
mainDecember 11, 2025 10:18
@gcapes
gcapes
changed the base branch from
main
to
developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes
gcapes
commented
Dec 11, 2025

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@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
@gcapes
gcapes
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Jan 6, 2026

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@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman
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Hopefully the above commit has done the trick.
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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
self-assigned this
Jan 7, 2026
@aplowman
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merged commit 5461c0a
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Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
Skip to content
Return none not object array - #52
Merged
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Conversation
@gcapes
@gcapesgcapes
commented
Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes
requested a review
from aplowman
as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes
changed the base branch from
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to
developDecember 4, 2025 11:58
@gcapesgcapes
mentioned this pull request
Dec 4, 2025

Closed

@gcapes
gcapes
changed the base branch from
develop
to
mainDecember 11, 2025 10:18
@gcapes
gcapes
changed the base branch from
main
to
developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes
gcapes
commented
Dec 11, 2025

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@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
@gcapes
gcapes
commented
Jan 6, 2026

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CollaboratorAuthor
@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman
aplowman
commented
Jan 6, 2026

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Hopefully the above commit has done the trick.
@dkfellows

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Jan 7, 2026•

edited

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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
self-assigned this
Jan 7, 2026
@aplowman
aplowman
merged commit 5461c0a
into
developJan 13, 2026

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Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
Skip to content
Return none not object array - #52
Merged
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Conversation
@gcapes
@gcapesgcapes
commented
Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes
requested a review
from aplowman
as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes
changed the base branch from
main
to
developDecember 4, 2025 11:58
@gcapesgcapes
mentioned this pull request
Dec 4, 2025

Closed

@gcapes
gcapes
changed the base branch from
develop
to
mainDecember 11, 2025 10:18
@gcapes
gcapes
changed the base branch from
main
to
developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes
gcapes
commented
Dec 11, 2025

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@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
@gcapes
gcapes
commented
Jan 6, 2026

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CollaboratorAuthor
@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman
aplowman
commented
Jan 6, 2026

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Hopefully the above commit has done the trick.
@dkfellows

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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
self-assigned this
Jan 7, 2026
@aplowman
aplowman
merged commit 5461c0a
into
developJan 13, 2026

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var __re = new RegExp('^' + "youtube\\.com" + '
Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
Skip to content
Return none not object array - #52
Merged
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Conversation
@gcapes
@gcapesgcapes
commented
Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes
requested a review
from aplowman
as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes
changed the base branch from
main
to
developDecember 4, 2025 11:58
@gcapesgcapes
mentioned this pull request
Dec 4, 2025

Closed

@gcapes
gcapes
changed the base branch from
develop
to
mainDecember 11, 2025 10:18
@gcapes
gcapes
changed the base branch from
main
to
developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes
gcapes
commented
Dec 11, 2025

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CollaboratorAuthor
@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
@gcapes
gcapes
commented
Jan 6, 2026

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CollaboratorAuthor
@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman
aplowman
commented
Jan 6, 2026

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Hopefully the above commit has done the trick.
@dkfellows

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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
self-assigned this
Jan 7, 2026
@aplowman
aplowman
merged commit 5461c0a
into
developJan 13, 2026

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(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
Skip to content
Return none not object array - #52
Merged
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Conversation
@gcapes
@gcapesgcapes
commented
Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes
requested a review
from aplowman
as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes
changed the base branch from
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Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
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@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
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@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
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Hopefully the above commit has done the trick.
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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
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Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
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Return none not object array - #52
Merged
aplowman merged 8 commits into
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return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
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return-none-not-object-array
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@gcapes
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Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
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requested a review
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as a code ownerDecember 4, 2025 11:57
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Dec 4, 2025

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@gcapes
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changed the base branch from
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@gcapes
gcapes
changed the base branch from
main
to
developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes
gcapes
commented
Dec 11, 2025

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@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
@gcapes
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Jan 6, 2026

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@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman
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Jan 6, 2026

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Hopefully the above commit has done the trick.
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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
self-assigned this
Jan 7, 2026
@aplowman
aplowman
merged commit 5461c0a
into
developJan 13, 2026

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, 'i');
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Return none not object array by gcapes · Pull Request #52 · LightForm-group/cipher-parse · GitHub
Skip to content
Return none not object array - #52
Merged
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Jan 13, 2026
Merged
Return none not object array#52
aplowman merged 8 commits into
developfrom 
return-none-not-object-array
Conversation
@gcapes
@gcapesgcapes
commented
Dec 4, 2025

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When seeds are not user-defined and take the default value of None, don't convert that into an object array of "None"s.
Fixes the issue described here: hpcflow/matflow#432 (comment)
@gcapes
Return None for default seeds value
c8f11f8
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
@gcapes
gcapes
requested a review
from aplowman
as a code ownerDecember 4, 2025 11:57
@gcapes
gcapes
changed the base branch from
main
to
developDecember 4, 2025 11:58
@gcapesgcapes
mentioned this pull request
Dec 4, 2025

Closed

@gcapes
gcapes
changed the base branch from
develop
to
mainDecember 11, 2025 10:18
@gcapes
gcapes
changed the base branch from
main
to
developDecember 11, 2025 10:19
@gcapes
Upgrade actions/cache from v2 to v4
0184f5b
@gcapes
Update Python version in CI workflow
08f71ec
Python 3.8 gave errors trying to install some of the dependencies
@gcapes
Remove deprecated(?) poetry config setting
2f67a96
@gcapes
Update Python version in CI workflow
174cbc6
3.13 gave an error that it wasn't supported by the project.
@gcapes
Change Python version in CI workflow to 3.10
7bfdf36
@gcapes
Try newer python setup version
5d0cfb8
Ubuntu tests were failing - everything else passed.
@gcapes
gcapes
commented
Dec 11, 2025

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CollaboratorAuthor
@aplowman

Are you able to get the last test passing? My last change made the ubuntu tests pass, but now one of the mac tests is failing.
@gcapes
gcapes
commented
Jan 6, 2026

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CollaboratorAuthor
@dkfellows Any ideas on how to get the final macos test of the os matrix running?
@aplowman
fix: setting phase orientations when a phase type has no phases (can …
cd9a1d0
…happen in the unrealistically small examples in the tests)
@aplowman
aplowman
commented
Jan 6, 2026

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Hopefully the above commit has done the trick.
@dkfellows

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@gcapes
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Jan 7, 2026•

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Great, thanks! But now it looks like the tests passed before you made that change (I'm sure they didn't) 🤷
@gcapesgcapes
self-assigned this
Jan 7, 2026
@aplowman
aplowman
merged commit 5461c0a
into
developJan 13, 2026

6 checks passed

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