Tutorial 2 fails in spod.get_data · Issue #50 · MathEXLab/PySPOD

Hello,
when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it?
Best wishes!
XUxu

The error log is shown as below:
Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy
Elapsed time: 0.45338940620422363 s.
C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part
return math.isfinite(val)
C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part
return np.asarray(x, float)
C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part
return math.isfinite(val)
C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part
return np.asarray(x, float)
Traceback (most recent call last):
File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec
pydev_imports.execfile(file, globals, locals) # execute the script
File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile
exec(compile(contents+"\n", file, 'exec'), glob, loc)
File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in
data = spod.get_data(data)
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data
d = d[...,np.newaxis]
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem
return self.isel(indexers=self._item_key_to_dict(key))
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel
ds = self._to_temp_dataset()._isel_fancy(
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy
new_var = var.isel(indexers=var_indexers)
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel
return self[key]
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem
dims, indexer, new_order = self._broadcast_indexes(key)
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes
return self._broadcast_indexes_outer(key)
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer
return dims, OuterIndexer(tuple(new_key)), None
File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init
raise TypeError(
TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object)
python-BaseException

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Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert Uh oh! There was an error while loading. Please reload this page. MathEXLab /PySPODPublic Notifications You must be signed in to change notification settings Fork 37 Star 128 Code Issues11 Pull requests2 Actions Projects Security and quality0 Insights Additional navigation options Code Issues Pull requests Actions Projects Security and quality Insights Tutorial 2 fails in spod.get_data #50 Copy link Copy link Open Open Tutorial 2 fails in spod.get_data#50 Copy link Description MemorXuxu opened on Jul 2, 2024 Issue body actions Hello, when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it? Best wishes! XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. 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XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment Metadata Metadata Assignees No one assigned Labels No labelsNo labels Type No type Projects No projects Milestone No milestone Relationships None yet Development No branches or pull requests Issue actions Footer © 2026 GitHub, Inc. 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Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert Uh oh! There was an error while loading. Please reload this page. MathEXLab /PySPODPublic Notifications You must be signed in to change notification settings Fork 37 Star 128 Code Issues11 Pull requests2 Actions Projects Security and quality0 Insights Additional navigation options Code Issues Pull requests Actions Projects Security and quality Insights Tutorial 2 fails in spod.get_data #50 Copy link Copy link Open Open Tutorial 2 fails in spod.get_data#50 Copy link Description MemorXuxu opened on Jul 2, 2024 Issue body actions Hello, when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it? Best wishes! XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. 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Footer navigation Terms Privacy Security Status Community Docs Contact You can’t perform that action at this time. , 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + ' Skip to contentNavigation Menu Sign inAppearance settings AI CODE CREATIONGitHub CopilotWrite better code with AI GitHub Copilot appDirect agents from issue to merge MCP RegistryIntegrate external tools DEVELOPER WORKFLOWSActionsAutomate any workflow CodespacesInstant dev environments IssuesPlan and track work Code ReviewManage code changes Code QualityEnforce quality at merge APPLICATION SECURITYGitHub Advanced SecurityFind and fix vulnerabilities Code securitySecure your code as you build Secret protectionStop leaks before they start EXPLOREWhy GitHub Documentation Blog Changelog Marketplace View all features BY COMPANY SIZEEnterprises Small and medium teams Startups Nonprofits BY USE CASEApp Modernization DevSecOps DevOps CI/CD View all use cases BY INDUSTRYHealthcare Financial services Manufacturing Government View all industries View all solutions EXPLORE BY TOPICAI Software Development DevOps Security View all topics EXPLORE BY TYPECustomer stories Events & webinars Ebooks & reports Business insights GitHub Skills SUPPORT & SERVICESDocumentation Customer support Community forum Trust center Partners View all resources COMMUNITYGitHub SponsorsFund open source developers PROGRAMSSecurity Lab Maintainer Community GitHub Stars Archive Program REPOSITORIESTopics Trending Collections ENTERPRISE SOLUTIONSEnterprise platformAI-powered developer platform AVAILABLE ADD-ONSGitHub Advanced SecurityEnterprise-grade security features Copilot for BusinessEnterprise-grade AI features Premium SupportEnterprise-grade 24/7 support Pricing Sign in Sign upAppearance settings You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert Uh oh! There was an error while loading. Please reload this page. MathEXLab /PySPODPublic Notifications You must be signed in to change notification settings Fork 37 Star 128 Code Issues11 Pull requests2 Actions Projects Security and quality0 Insights Additional navigation options Code Issues Pull requests Actions Projects Security and quality Insights Tutorial 2 fails in spod.get_data #50 Copy link Copy link Open Open Tutorial 2 fails in spod.get_data#50 Copy link Description MemorXuxu opened on Jul 2, 2024 Issue body actions Hello, when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it? Best wishes! XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment Metadata Metadata Assignees No one assigned Labels No labelsNo labels Type No type Projects No projects Milestone No milestone Relationships None yet Development No branches or pull requests Issue actions Footer © 2026 GitHub, Inc. Footer navigation Terms Privacy Security Status Community Docs Contact You can’t perform that action at this time. , 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Skip to contentNavigation Menu Sign inAppearance settings AI CODE CREATIONGitHub CopilotWrite better code with AI GitHub Copilot appDirect agents from issue to merge MCP RegistryIntegrate external tools DEVELOPER WORKFLOWSActionsAutomate any workflow CodespacesInstant dev environments IssuesPlan and track work Code ReviewManage code changes Code QualityEnforce quality at merge APPLICATION SECURITYGitHub Advanced SecurityFind and fix vulnerabilities Code securitySecure your code as you build Secret protectionStop leaks before they start EXPLOREWhy GitHub Documentation Blog Changelog Marketplace View all features BY COMPANY SIZEEnterprises Small and medium teams Startups Nonprofits BY USE CASEApp Modernization DevSecOps DevOps CI/CD View all use cases BY INDUSTRYHealthcare Financial services Manufacturing Government View all industries View all solutions EXPLORE BY TOPICAI Software Development DevOps Security View all topics EXPLORE BY TYPECustomer stories Events & webinars Ebooks & reports Business insights GitHub Skills SUPPORT & SERVICESDocumentation Customer support Community forum Trust center Partners View all resources COMMUNITYGitHub SponsorsFund open source developers PROGRAMSSecurity Lab Maintainer Community GitHub Stars Archive Program REPOSITORIESTopics Trending Collections ENTERPRISE SOLUTIONSEnterprise platformAI-powered developer platform AVAILABLE ADD-ONSGitHub Advanced SecurityEnterprise-grade security features Copilot for BusinessEnterprise-grade AI features Premium SupportEnterprise-grade 24/7 support Pricing Sign in Sign upAppearance settings You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert Uh oh! There was an error while loading. Please reload this page. MathEXLab /PySPODPublic Notifications You must be signed in to change notification settings Fork 37 Star 128 Code Issues11 Pull requests2 Actions Projects Security and quality0 Insights Additional navigation options Code Issues Pull requests Actions Projects Security and quality Insights Tutorial 2 fails in spod.get_data #50 Copy link Copy link Open Open Tutorial 2 fails in spod.get_data#50 Copy link Description MemorXuxu opened on Jul 2, 2024 Issue body actions Hello, when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it? Best wishes! XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment Metadata Metadata Assignees No one assigned Labels No labelsNo labels Type No type Projects No projects Milestone No milestone Relationships None yet Development No branches or pull requests Issue actions Footer © 2026 GitHub, Inc. Footer navigation Terms Privacy Security Status Community Docs Contact You can’t perform that action at this time. , 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Skip to contentNavigation Menu Sign inAppearance settings AI CODE CREATIONGitHub CopilotWrite better code with AI GitHub Copilot appDirect agents from issue to merge MCP RegistryIntegrate external tools DEVELOPER WORKFLOWSActionsAutomate any workflow CodespacesInstant dev environments IssuesPlan and track work Code ReviewManage code changes Code QualityEnforce quality at merge APPLICATION SECURITYGitHub Advanced SecurityFind and fix vulnerabilities Code securitySecure your code as you build Secret protectionStop leaks before they start EXPLOREWhy GitHub Documentation Blog Changelog Marketplace View all features BY COMPANY SIZEEnterprises Small and medium teams Startups Nonprofits BY USE CASEApp Modernization DevSecOps DevOps CI/CD View all use cases BY INDUSTRYHealthcare Financial services Manufacturing Government View all industries View all solutions EXPLORE BY TOPICAI Software Development DevOps Security View all topics EXPLORE BY TYPECustomer stories Events & webinars Ebooks & reports Business insights GitHub Skills SUPPORT & SERVICESDocumentation Customer support Community forum Trust center Partners View all resources COMMUNITYGitHub SponsorsFund open source developers PROGRAMSSecurity Lab Maintainer Community GitHub Stars Archive Program REPOSITORIESTopics Trending Collections ENTERPRISE SOLUTIONSEnterprise platformAI-powered developer platform AVAILABLE ADD-ONSGitHub Advanced SecurityEnterprise-grade security features Copilot for BusinessEnterprise-grade AI features Premium SupportEnterprise-grade 24/7 support Pricing Sign in Sign upAppearance settings You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert Uh oh! There was an error while loading. Please reload this page. MathEXLab /PySPODPublic Notifications You must be signed in to change notification settings Fork 37 Star 128 Code Issues11 Pull requests2 Actions Projects Security and quality0 Insights Additional navigation options Code Issues Pull requests Actions Projects Security and quality Insights Tutorial 2 fails in spod.get_data #50 Copy link Copy link Open Open Tutorial 2 fails in spod.get_data#50 Copy link Description MemorXuxu opened on Jul 2, 2024 Issue body actions Hello, when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it? Best wishes! XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. 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Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert Uh oh! There was an error while loading. Please reload this page. MathEXLab /PySPODPublic Notifications You must be signed in to change notification settings Fork 37 Star 128 Code Issues11 Pull requests2 Actions Projects Security and quality0 Insights Additional navigation options Code Issues Pull requests Actions Projects Security and quality Insights Tutorial 2 fails in spod.get_data #50 Copy link Copy link Open Open Tutorial 2 fails in spod.get_data#50 Copy link Description MemorXuxu opened on Jul 2, 2024 Issue body actions Hello, when running the tutorial 2,in the line 138 'data = spod.get_data(data)' and the error shows up. Could anyone give me a hand to solve it? Best wishes! XUxu The error log is shown as below: Reconstructed data saved in: D:\spod\PySPOD-main\tutorials\tutorial2\spod_results\nfft730_novlp0_nblks10\coeffs_0_365\reconstructed.npy Elapsed time: 0.45338940620422363 s. C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1762: ComplexWarning: Casting complex values to real discards the imaginary part return math.isfinite(val) C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\matplotlib-3.9.0-py3.9-win-amd64.egg\matplotlib\cbook.py:1398: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray(x, float) Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev\pydevd.py", line 1534, in _exec pydev_imports.execfile(file, globals, locals) # execute the script File "C:\Program Files\JetBrains\PyCharm 2023.3.2\plugins\python\helpers\pydev_pydev_imps_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "D:\spod\PySPOD-main\tutorials\tutorial2\tutorial2.py", line 138, in data = spod.get_data(data) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\pyspod-2.0.0-py3.9.egg\pyspod\spod\base.py", line 826, in get_data d = d[...,np.newaxis] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 876, in getitem return self.isel(indexers=self._item_key_to_dict(key)) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataarray.py", line 1501, in isel ds = self._to_temp_dataset()._isel_fancy( File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\dataset.py", line 3029, in _isel_fancy new_var = var.isel(indexers=var_indexers) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 1033, in isel return self[key] File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 797, in getitem dims, indexer, new_order = self._broadcast_indexes(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 642, in _broadcast_indexes return self._broadcast_indexes_outer(key) File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\variable.py", line 724, in _broadcast_indexes_outer return dims, OuterIndexer(tuple(new_key)), None File "C:\ProgramData\anaconda3\envs\spodProject\lib\site-packages\xarray-2024.6.0-py3.9.egg\xarray\core\indexing.py", line 434, in init raise TypeError( TypeError: invalid indexer array, does not have integer dtype: array(None, dtype=object) python-BaseException Reactions are currently unavailable Activity Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment Metadata Metadata Assignees No one assigned Labels No labelsNo labels Type No type Projects No projects Milestone No milestone Relationships None yet Development No branches or pull requests Issue actions Footer © 2026 GitHub, Inc. Footer navigation Terms Privacy Security Status Community Docs Contact You can’t perform that action at this time.