Mitter-lab

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1. amiR_target_finder amiR_target_finderPublic

   amiR_target_finder identifies a minimum set of artificial micoRNA/s (and their star strands) that can target all sequences in a FASTA format reference seqeunce file.

   Python

2. ds_RNA_target_window ds_RNA_target_windowPublic

   Identifies optimal window for dsRNA targeting

   Python

3. mitter_et_al_CMV_boxplot mitter_et_al_CMV_boxplotPublic

   R

4. mitter_et_al_R_code mitter_et_al_R_codePublic

   R code for Nature Plants submission

   R

5. trinity_unigene trinity_unigenePublic

   Filter longest trinity transcript as unigene

   Python 1

6. get_de_genes get_de_genesPublic

   Python