OATML-Markslab

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1. ProteinGym ProteinGymPublic

   Official repository for the ProteinGym benchmarks

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2. EVE EVEPublic

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   Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

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3. Tranception TranceptionPublic

   Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

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4. ProteinNPT ProteinNPTPublic

   Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

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5. EVEscape EVEscapePublic

   Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

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6. Protriever ProtrieverPublic

   Official repository for the Protriever paper

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