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@PAMepi

PAMepi

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  1. PAMepi-site PAMepi-sitePublic

    This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript 3

  2. PAMepi_scripts_datalake PAMepi_scripts_datalakePublic

    This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook 2

  3. webViz webVizPublic

    A web aplication to visualize results of..

    R

  4. dash_model dash_modelPublic

    Models for city and state the fits/prediction presented in the dashboard

    Python

  5. JAS JASPublic

    Python

  6. PAMepi-models PAMepi-modelsPublic

    A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

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Showing 8 of 8 repositories

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, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
 blocks
(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
PAMepi · GitHub
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@PAMepi

PAMepi


Popular repositories
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  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
(function() {
var style = document.createElement('style');
style.textContent = '
.markdown-body {
color-scheme: dark light;
}
.markdown-body pre { background: #161b22 !important; }
.markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }
.markdown-body table th, .markdown-body table td { border-color: #30363d !important; }
.markdown-body img { background: #0d1117; }
.markdown-body blockquote { border-left-color: #8b949e; }
.markdown-body hr { border-color: #30363d; }
';
document.head.appendChild(style);
})();
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
PAMepi · GitHub
Skip to content
@PAMepi

PAMepi


Popular repositories
Loading
  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
Top languages
Loading…
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Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Highlight search terms from Google/DuckDuckGo/Bing referrer
(function() {
var ref = document.referrer;
var terms = [];
if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {
var url = new URL(ref);
var q = url.searchParams.get('q') || url.searchParams.get('p');
if (q) {
terms = q.split(/\s+/).filter(function(t) { return t.length > 2; });
}
}
if (terms.length === 0) return;
var style = document.createElement('style');
style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';
document.head.appendChild(style);
function highlight(node) {
if (node.nodeType === 3) { // text node
var text = node.textContent;
var found = false;
terms.forEach(function(term) {
var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi');
if (regex.test(text)) {
found = true;
var frag = document.createDocumentFragment();
var parts = text.split(regex);
parts.forEach(function(part, i) {
if (i % 2 === 0) {
frag.appendChild(document.createTextNode(part));
} else {
var span = document.createElement('span');
span.className = 'userscript-highlight';
span.textContent = part;
frag.appendChild(span);
}
});
node.parentNode.replaceChild(frag, node);
}
});
} else if (node.nodeType === 1 && node.childNodes) { // element
var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];
if (!skipTags.includes(node.tagName)) {
Array.from(node.childNodes).forEach(highlight);
}
}
}
highlight(document.body);
// Re-highlight on dynamic content
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1 || node.nodeType === 3) highlight(node);
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
PAMepi · GitHub
Skip to content
@PAMepi

PAMepi


Popular repositories
Loading
  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
(function() {
var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',
'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
'ref', 'ref_src', 'source', 'medium', 'campaign'];
function cleanUrl(url) {
try {
var u = new URL(url, window.location.origin);
var changed = false;
trackingParams.forEach(function(p) {
if (u.searchParams.has(p)) {
u.searchParams.delete(p);
changed = true;
}
});
return changed ? u.toString() : url;
} catch (e) {
return url;
}
}
function cleanLinks() {
document.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
cleanLinks();
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1) {
if (node.tagName === 'A') cleanLinks();
node.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '
PAMepi · GitHub
Skip to content
@PAMepi

PAMepi


Popular repositories
Loading
  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
Top languages
Loading…
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Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
btn.click();
}
}
// Try immediately
tryTheater();
// Try after navigation (SPA)
var lastUrl = location.href;
setInterval(function() {
if (location.href !== lastUrl) {
lastUrl = location.href;
setTimeout(tryTheater, 500);
}
}, 1000);
// Also try on player load
var observer = new MutationObserver(tryTheater);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
PAMepi · GitHub
Skip to content
@PAMepi

PAMepi


Popular repositories
Loading
  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {
el.style.position = 'static';
el.style.top = 'auto';
el.style.zIndex = 'auto';
}
});
}
unstick();
var observer = new MutationObserver(unstick);
observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
PAMepi · GitHub
Skip to content
@PAMepi

PAMepi


Popular repositories
Loading
  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Universal Dark Mode - works on any site
(function() {
var enabled = true;
function applyDarkMode() {
if (!enabled) return;
// Create style element if it doesn't exist
var style = document.getElementById('universal-dark-mode-style');
if (!style) {
style = document.createElement('style');
style.id = 'universal-dark-mode-style';
document.head.appendChild(style);
}
// Dark mode CSS - inverts colors but preserves images/video
style.textContent = '
/* Invert everything except media */
html {
filter: invert(1) hue-rotate(180deg) !important;
background: #1a1a2e !important;
}
/* Restore images, videos, iframes, canvas */
img, video, iframe, canvas, svg, picture, [style*="background-image"] {
filter: invert(1) hue-rotate(180deg) !important;
}
/* Preserve specific elements that should not be inverted */
.no-dark-mode, .no-dark-mode *,
[data-theme="light"], [data-theme="light"],
.ace_editor, .ace_editor *,
.CodeMirror, .CodeMirror *,
.monaco-editor, .monaco-editor *,
.markdown-body pre, .markdown-body pre *,
.highlight, .highlight *,
pre code, pre code * {
filter: none !important;
}
/* Fix common UI elements */
.modal, .popup, .dropdown-menu, .tooltip, .popover {
filter: invert(1) hue-rotate(180deg) !important;
background: #2d2d44 !important;
border-color: #444 !important;
}
/* Scrollbars */
::-webkit-scrollbar { background: #1a1a2e !important; }
::-webkit-scrollbar-thumb { background: #444 !important; }
::-webkit-scrollbar-thumb:hover { background: #555 !important; }
/* Selection */
::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
';
}
function removeDarkMode() {
var style = document.getElementById('universal-dark-mode-style');
if (style) style.remove();
}
// Toggle with Alt+Shift+D
document.addEventListener('keydown', function(e) {
if (e.altKey && e.shiftKey && e.key === 'D') {
e.preventDefault();
enabled = !enabled;
if (enabled) {
applyDarkMode();
console.log('[Universal Dark Mode] Enabled');
} else {
removeDarkMode();
console.log('[Universal Dark Mode] Disabled');
}
}
});
// Apply on load
applyDarkMode();
// Re-apply on dynamic content
var observer = new MutationObserver(function(mutations) {
if (enabled && !document.getElementById('universal-dark-mode-style')) {
applyDarkMode();
}
});
observer.observe(document.head, { childList: true });
console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');
})();
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();
PAMepi · GitHub
Skip to content
@PAMepi

PAMepi


Popular repositories
Loading
  1. 
PAMepi-site
PAMepi-sitePublic
    
This directory develops the website of the PAMEpi. The codes presented here allow us to build an interactive tool to analyse data, statistical, computational and mathematical modelling and promote …

    JavaScript
3

  2. 
PAMepi_scripts_datalake
PAMepi_scripts_datalakePublic
    
This directory builds the data architecture of the PAMEpi. It describes which data is collected, how it is stored, arranged, integrated, and put to use for analyses, modelling and visualization.

    Jupyter Notebook
2

  3. 
webViz
webVizPublic
    
A web aplication to visualize results of..

    R
  4. 
dash_model
dash_modelPublic
    
Models for city and state the fits/prediction presented in the dashboard

    Python
  5. 
JAS
JASPublic
    Python
  6. 
PAMepi-models
PAMepi-modelsPublic
    
A directory made to implement and study mathematical models for diseases. Here you can find codes to calculate the spread of diseases, simulate future scenarios, fit the models to data, analyse the…

    Jupyter Notebook

Repositories

Showing 8 of 8 repositories
Top languages
Loading…
Most used topics
Loading…