PennChopMicrobiomeProgram

vccweb Public

HVP Virome Characterization Center (VCC) sample browser

HTML 0 0 0 0 Updated Aug 9, 2026

Web application to keep track of samples sequenced

Python 0 3 8 4 Updated Jul 30, 2026

marc_db Public

Python 0 0 0 2 Updated Jul 20, 2026

Type strain identification for 16S reads

Python 5 5 8 4 Updated Jun 18, 2026

A web interface for querying mARC

HTML 0 2 0 7 Updated May 11, 2026

FASTQ utilities in pure python with no dependencies

Jupyter Notebook 0 1 6 3 Updated Apr 16, 2026

HTML 0 3 11 8 Updated Apr 13, 2026

Trim primers from reads

Python 1 1 0 1 Updated Apr 8, 2026

dnabc Public

Identify DNA barcodes in high-throughput sequencing data files

Python 0GPL-2.0 6 0 5 Updated Apr 8, 2026

R 3GPL-3.0 2 1 0 Updated Apr 6, 2026

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