RECETOX RI (EIRENE-CZ)

Provides functionality to validate and read mzML files, a standard format for mass spectrometry data.

The code base includes a collection of scripts and GitHub Actions designed to gather various metrics on RECETOX's impact.

PyFilesystem2 extension for iRODS

Python wrapper for Thermo Fisher RawFileReader library - read .raw mass spectrometry files in Python

Implements an MsBackend for the Spectra package using the mzmlr package to read and process mzML mass spectrometry files. The package provides memory-efficient on-disk access to mzML data without requiring the mzR package dependency. Methods defined in this package extend the Spectra Bioconductor package infrastructure.

RIAssigner is a python tool for retention index (RI) computation for GC-MS data.

Set of Galaxy tool wrappers developed at RECETOX