RNA-Puzzles

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1. RNA_assessment RNA_assessmentPublic

   Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils.

   HTML 27 7

2. rna-tools rna-toolsPublic

   Forked from mmagnus/rna-tools

   🔧rna-tools (prev. rna-pdb-tools): a toolbox to analyze sequences, structures and simulations of RNA - docs @ http://rna-tools.rtfd.io web version http://rna-tools.online

   Jupyter Notebook 6 3

3. standardized_dataset standardized_datasetPublic

   Forked from mmagnus/RNA-Puzzles-Standardized-Submissions

   Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip

   Shell 6 1

4. comparison_metrics_list comparison_metrics_listPublic

   Assessment metrics tools to compare RNA 3D structures.

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5. RoundV_reproducibility RoundV_reproducibilityPublic

   Jupyter Notebook 3

6. raw_dataset_and_for_assessment raw_dataset_and_for_assessmentPublic

   This repository includes all the submitted RNA structures in RNA-Puzzles, include the `raw_dataset` and the `normalized_dataset`

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