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@RTXteam

Development team for the RTX biomedical reasoning tool

Popular repositories Loading

  1. RTX-KG2 RTX-KG2Public

    Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python 59 10

  2. RTX RTXPublic

    Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python 46 27

  3. PloverDB PloverDBPublic

    An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python 8 11

  4. NL2TRAPI NL2TRAPIPublic

    A prototype investigation of converting natural language questions to the TRAPI format

    Python 1 1

  5. xDTD_training_pipeline xDTD_training_pipelinePublic

    This repo is created for hosting a pipeline for automatically training xDTD model.

    Python 1 3

  6. umls2rdf umls2rdfPublic

    Forked from ncbo/umls2rdf

    These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

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, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
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try {
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var __re = new RegExp('^' + "github\\.com" + '
Development team for the RTX biomedical reasoning tool · GitHub
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@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
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  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
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var style = document.createElement('style');
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})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Development team for the RTX biomedical reasoning tool · GitHub
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@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
Loading
  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
View all repositories
Top languages
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Loading…

, 'i');
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} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Development team for the RTX biomedical reasoning tool · GitHub
Skip to content
@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
Loading
  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
View all repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
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'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
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document.querySelectorAll('a[href]').forEach(function(a) {
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cleanLinks();
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mutations.forEach(function(m) {
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if (node.tagName === 'A') cleanLinks();
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if (clean !== a.href) a.href = clean;
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observer.observe(document.body, { childList: true, subtree: true });
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} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '
Development team for the RTX biomedical reasoning tool · GitHub
Skip to content
@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
Loading
  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
View all repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
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observer.observe(document.body, { childList: true, subtree: true });
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} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Development team for the RTX biomedical reasoning tool · GitHub
Skip to content
@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
Loading
  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
View all repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {
el.style.position = 'static';
el.style.top = 'auto';
el.style.zIndex = 'auto';
}
});
}
unstick();
var observer = new MutationObserver(unstick);
observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Development team for the RTX biomedical reasoning tool · GitHub
Skip to content
@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
Loading
  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
View all repositories
Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Universal Dark Mode - works on any site
(function() {
var enabled = true;
function applyDarkMode() {
if (!enabled) return;
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var style = document.getElementById('universal-dark-mode-style');
if (!style) {
style = document.createElement('style');
style.id = 'universal-dark-mode-style';
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style.textContent = '
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filter: invert(1) hue-rotate(180deg) !important;
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filter: invert(1) hue-rotate(180deg) !important;
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console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');
})();
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} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();
Development team for the RTX biomedical reasoning tool · GitHub
Skip to content
@RTXteam

Development team for the RTX biomedical reasoning tool


Popular repositories
Loading
  1. 
RTX-KG2
RTX-KG2Public
    
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python
59

10

  2. 
RTX
RTXPublic
    
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python
46

27

  3. 
PloverDB
PloverDBPublic
    
An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python
8

11

  4. 
NL2TRAPI
NL2TRAPIPublic
    
A prototype investigation of converting natural language questions to the TRAPI format

    Python
1

1

  5. 
xDTD_training_pipeline
xDTD_training_pipelinePublic
    
This repo is created for hosting a pipeline for automatically training xDTD model.

    Python
1

3

  6. 
umls2rdf
umls2rdfPublic
    
Forked from ncbo/umls2rdf
    
These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 27 repositories
View all repositories
Top languages
Loading…
Most used topics
Loading…