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Achievement: Pair Extraordinairex2Achievement: YOLOAchievement: StarstruckAchievement: Public SponsorAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex2Achievement: YOLOAchievement: StarstruckAchievement: Public SponsorAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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Robaina/README.md

Hi 👋,

I'm Semi. Here you'll find source code for packages, research scripts, and fun side projects I have worked on.

About me

  • ❤️ Python, scientific programming, open source, AI & machine learning, bioinformatics, computational biology, building web apps

  • 💬 Open to collaborations!

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  1. PyntenyPyntenyPublic

    Query sequence database by HMMs arranged in predefined synteny structure

    Python 20 2

  2. BRENDApyrserBRENDApyrserPublic

    A Python parser for the BRENDA database

    Python 33 11

  3. ProteusProteusPublic

    A python tool to optimize protein properties through AI-guided directed evolution

    Python 1

  4. chemSearchchemSearchPublic

    Search genomes by chemical compounds

    Jupyter Notebook 1

  5. ProtScoutProtScoutPublic

    Filter protein sequences by predicted protein properties

    Python 1

  6. filterSAMfilterSAMPublic

    Tools to filter SAM/BAM files by percent identity and percent of matched sequence

    Python 6 1