SIMEXP

Benchmarking neuroimaging foundation models (BrainLM, BrainHarmonix) on the PREVENT-AD dataset for downstream prediction of clinical and biological targets.

website of the SIMEXP lab

Automatic data fetcher from the web

All fMRI data procressing used for Prevent-AD internal data release 8.0.

Benchmark denoising strategies available from fmriprep.

Preprocess datasets using fMRIPrep

Automatic quality control for fMRIPrep outputs aimed for large dataset

Generate and run SLURM jobs on HPCs

Scripts to convert data from CCNA and CIMAQ

get ukbb data in shape for other projects