Scialdone Lab

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1. CIARA CIARAPublic

   CIARA (Cluster Independent Algorithm for the identification of markers of RAre cell types) is an R package that identifies potential markers of rare cell types looking at genes whose expression is…

   R 18 2

2. COMUNET COMUNETPublic template

   COMUNET: a tool to explore and visualize intercellular communication

   Jupyter Notebook 13 9

3. CIARA_python CIARA_pythonPublic

   Implementation of entropy of mixing algorithm in python

   Jupyter Notebook 10 1

4. STREAMLINE STREAMLINEPublic

   STREAMLINE (Topological benchmarking of GRN inference from scRNA-Sequencing data)

   HTML 8

5. TEbenchmarking TEbenchmarkingPublic

   Benchmarking computational tools for locus-specific analysis of transposable elements in single-cell RNA-seq datasets

   Jupyter Notebook 7 5

6. human-gastrula-shiny human-gastrula-shinyPublic

   R 4 1