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1. subread subreadPublic

   The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon junction detector and featureCounts read summarization program.

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2. GeneAnnotation GeneAnnotationPublic

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3. ReadTrimming ReadTrimmingPublic

   Data and code for the publication "Read trimming is not required for mapping and quantification of RNA-seq reads at the gene level" in NAR Genomics and Bioinformatics.

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4. ShiLab-Bioinformatics.github.io ShiLab-Bioinformatics.github.ioPublic

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5. VariantAlign VariantAlignPublic

   A bioinformatics tool to efficiently map sequencing reads to a reference sequence library.

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