Systems Biology Lab, Vrije Universiteit Amsterdam

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1. stochpystochpyPublic

   StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks

   Python 44 11

2. ecmtoolecmtoolPublic

   Uncover organisms' metabolic blueprints

   Python 18 6

3. elementary-mode-based-FBA-rationaleelementary-mode-based-FBA-rationalePublic

   Code that uses Elementary Conversion Mode computation to obtain all relevant conversions for a constraint-based optimization problem, i.e., all possible optimal yields between the constrained nutri…

   Python 2