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Achievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor

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TimD1/README.md

Staff Bioinformatics Scientist at Fulcrum Genomics in Ann Arbor, MI.

I work on genomics tooling with a focus on long-read sequencing, variant calling, and benchmarking.

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  1. vcfdistvcfdistPublic

    vcfdist: Accurately benchmarking phased variant calls

    C++ 89 8

  2. nPoRenPoRePublic

    nPoRe: n-Polymer Realigner for improved pileup-based variant calling

    Python 19

  3. SquiggleFilterSquiggleFilterPublic

    Hardware accelerator for real-time ReadUntil filtering of nanopore sequencing squiggles.

    Python 10

  4. S4-Simple-Small-SDP-SolverS4-Simple-Small-SDP-SolverPublic

    MATLAB Software for SemiDefinite Programming

    MATLAB 4