Wang Genomics Lab

Pipeline to call phenotype variant

A long-read, whole-genome structural variant (SV) caller with copy number predictions

Assign confidence scores to SV datasets based on coverage, genomic context, and other important alignment features

Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single-cell RNA sequencing

Joint inference of haplotypes and allele-specific expression from long-read bulk and single-cell RNA-seq

ML project for de novo anomaly-detection-based modification discovery

PhenoGPT2 is an advanced phenotype recognition model, leveraging the robust capabilities of large language models.

DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads