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  1. CEGRcode/scriptmanagerCEGRcode/scriptmanagerPublic

    genomics toolbox that supports both graphical and command-line execution

    Java 15 6

  2. EpiGenomicsCode/ProteinStructure-OODEpiGenomicsCode/ProteinStructure-OODPublic

    HTML 7 4

  3. CEGRcode/GenoPipeCEGRcode/GenoPipePublic

    Toolkit for characterizing the genotype of NGS datasets

    Shell 4 1

  4. EpiGenomicsCode/ChromEnhancerEpiGenomicsCode/ChromEnhancerPublic

    Shell 1

  5. ArchAlignArchAlignPublic

    ArchAlign: coordinate-free chromatin alignment reveals novel architectures

    C++

  6. ArchTExArchTExPublic

    Accurate Extraction and Visualization of Next-Generation Sequence data

    Java