YangLab@HKUST

MacSGP: Mapping Cell-Type-Specific Spatial Gene Programs Uncovers Tissue Architecture and Microenvironment Organization

Python 3MIT 0 0 0 Updated Aug 10, 2026

Jupyter Notebook 0 0 0 0 Updated Aug 10, 2026

Hierarchical distribution matching enables comprehensive characterization of common and condition-specific cell niches in spatial omics data

Python 6MIT 0 0 0 Updated Aug 8, 2026

stGP Public

stGP: Characterizing dynamic tissue architectures by identifying cell-type-specific spatiotemporal gene programs

Jupyter Notebook 2MIT 0 0 0 Updated Jul 16, 2026

Python 2MIT 1 0 0 Updated Jul 8, 2026

Jupyter Notebook 0 0 0 0 Updated Jul 5, 2026

MCube Public

A unified framework for identification of cell-type-specific spatially variable genes in spatial transcriptomic studies

R 8GPL-3.0 0 0 0 Updated Jul 4, 2026

Jupyter Notebook 0 0 0 0 Updated Jun 26, 2026

STAT: Spatial Transcriptomics Analytical agenT - AI-powered platform for spatial omics analysis

Python 2BSD-3-Clause 1 0 0 Updated May 12, 2026

MR-APSS Public

Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics

R 44MIT 10 5 1 Updated Apr 30, 2026

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