All issues

Search results

TypeError: an integer is required

Status: Open.

#123In YosefLab/Compass;

· dnavi23 opened on Apr 10, 2025

Empty "reactions.tsv" output

Status: Open.

#122In YosefLab/Compass;

· LeMon2582 opened on Feb 11, 2025

Does compass better separating the anndata by cell type?

Status: Open.

#121In YosefLab/Compass;

· giuliaelgarcia opened on Dec 10, 2024

COMPASS running so slowly!!!!

Status: Open.

#120In YosefLab/Compass;

· wuxiangning opened on Nov 19, 2024

Can not install compass

Status: Open.

#119In YosefLab/Compass;

· wuxiangning opened on Nov 19, 2024

What do the expected output files look like in COMPASS?

Status: Open.

#116In YosefLab/Compass;

· skoturan opened on Oct 30, 2024

Under pathological conditions, is it normal that all metabolic reactions are upregulated?

Status: Open.

#114In YosefLab/Compass;

· jouska540 opened on Oct 9, 2024

multiprocessing.pool.MaybeEncodingError: Error sending result: '<multiprocessing.pool.ExceptionWithTraceback object at 0x7f840db71ee0>'. Reason: 'TypeError("cannot pickle 'SwigPyObject' object")'

Status: Open.

#113In YosefLab/Compass;

· xwt778 opened on Sep 28, 2024

tested versions of dependencies for building compass docker image

Status: Open.

#112In YosefLab/Compass;

· rajuadduri opened on Sep 11, 2024

need for Docker image

Status: Open.

#111In YosefLab/Compass;

· pengbo233 opened on Aug 13, 2024

normalization

Status: Open.

#110In YosefLab/Compass;

· shimasadri opened on Jul 22, 2024

Seeking Guidance on Data Format (my own reaction and genes files from KEGG) Conversion for COMPASS Analysis

Status: Open.

#108In YosefLab/Compass;

· ptdang1001 opened on Mar 26, 2024