fix: resolve NiceGUI drawer JavaScript timeout on run results

[olivermeyer]

Currently we first get run results, and only then render the GUI frame. If the former takes longer than 1s, we get a JS timeout error. After this change, we first render the frame and then get run results and populate the frame.

[github-actions]

Claude encountered an error —— View job

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[codecov]

❌ 1 Tests Failed:

Tests completed	Failed	Passed	Skipped
563	1	562	3

View the top 1 failed test(s) by shortest run time

tests.aignostics.application.gui_test::test_gui_run_results_pagination_show_more_button_hidden_when_few_results

Stack Traces | 47.1s run time

user = <nicegui.testing.user.User object at 0x7ffb969c9590>
silent_logging = None
record_property = <function record_property.<locals>.append_property at 0x7ffb9c400c20>
@pytest.mark.integration
@pytest.mark.sequential
@pytest.mark.skipif(
platform.system() == "Darwin" and platform.machine() == "arm64" and sys.version_info >= (3, 13),
reason="GUI tests unstable on macOS Apple Silicon with Python 3.13 (GitHub Actions runner architecture issues)",
)
@pytest.mark.flaky(retries=2, delay=5, only_on=[AssertionError])
@pytest.mark.timeout(timeout=60)
async def test_gui_run_results_pagination_show_more_button_hidden_when_few_results(
user: User, silent_logging: None, record_property
) -> None:
"""Test that the 'Show more' button is hidden when there are fewer results than the page size.
Raises:
AssertionError: If the button is visible when it shouldn't be.
"""
record_property("tested-item-id", "SPEC-APPLICATION-SERVICE, SPEC-GUI-SERVICE")
# Find a run with fewer items than RESULTS_PAGE_SIZE
runs = Service().application_runs(
application_id=HETA_APPLICATION_ID,
application_version=HETA_APPLICATION_VERSION,
has_output=True,
limit=20,
)
# Find a run with few enough items
run_with_few_items = None
for run in runs:
if 0 < run.statistics.item_count <= RESULTS_PAGE_SIZE:
run_with_few_items = run
print(f"Found run {run.run_id} with {run.statistics.item_count} items for pagination test.")
break
if run_with_few_items is None:
pytest.skip(
f"No runs found with 1-{RESULTS_PAGE_SIZE} items for {HETA_APPLICATION_ID} ({HETA_APPLICATION_VERSION})"
)
# Navigate to the run page
await user.open(f"/application/run/{run_with_few_items.run_id}")
> await user.should_see(f"Run {run_with_few_items.run_id}", retries=100)
.../aignostics/application/gui_test.py:501: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <nicegui.testing.user.User object at 0x7ffb969c9590>
target = 'Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5'
async def should_see(self,
target: str | type[T] | None = None,
*,
kind: type[T] | None = None,
marker: str | list[str] | None = None,
content: str | list[str] | None = None,
retries: int = 3,
) -> None:
"""Assert that the page contains an element fulfilling certain filter rules.
Note that there is no scrolling in the user simulation -- the entire page is always *visible*.
Due to asynchronous execution, sometimes the expected elements only appear after a short delay.
By default `should_see` makes three attempts to find the element before failing.
This can be adjusted with the `retries` parameter.
"""
for _ in range(retries):
with self._client:
if self.notify.contains(target) or self._gather_elements(target, kind, marker, content):
return
await asyncio.sleep(0.1)
> raise AssertionError('expected to see at least one ' + self._build_error_message(target, kind, marker, content))
E AssertionError: expected to see at least one element with marker=Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5 or content=Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5 on the page:
E q-layout
E Header [model-value=True, elevated=True, add_scroll_padding=True]
E Link [href=/, target=_self]
E Image [src=/assets/logo.png]
E Tooltip [text=Go to start page]
E Space
E Icon [name=hourglass_empty]
E Tooltip [text=Loading run bbc7b3a0...]
E Label [text=Loading run bbc7b3a0...]
E Space
E DarkMode
E Button [icon=dark_mode, visible=False]
E RefreshableContainer
E Spinner [size=1em, thickness=5.0, flat=True, visible=False]
E DropdownButton [icon=img:https://s.gravat..., flat=True]
E Card
E Row
E Image [src=https://s.gravatar.c...]
E Column
E Label [text=Andreas Kunft (andre...]
E Label [text=Admin at aignostics]
E Label [text=Authentication valid...]
E Separator
E Row
E Button [label=Re-authenticate now, icon=switch_account]
E Space
E Button [label=Edit Profile, icon=edit]
E Button [icon=folder_special, flat=True]
E Tooltip [text=Open data directory...]
E Button [icon=menu, flat=True]
E Tooltip [text=Open menu]
E LeftDrawer [model-value=True, side=left, elevated=True, breakpoint=0]
E List [bordered=True, separator=True]
E ItemLabel [text=Applications, header=True]
E Separator
E Item [markers=SIDEBAR_APPLICATION:he-tme, clickable=True]
E ItemSection [avatar=True]
E Icon [name=biotech]
E Tooltip [text=he-tme]
E ItemSection
E Label [text=Atlas H&E-TME]
E Item [markers=SIDEBAR_APPLICATION:test-app, clickable=True]
E ItemSection [avatar=True]
E Icon [name=construction]
E Tooltip [text=test-app]
E ItemSection
E Label [text=test-app]
E List [bordered=True, separator=True]
E Row
E ItemLabel [text=Runs, header=True]
E Input [markers=INPUT_RUNS_FILTER_NOTE_OR_TAGS, placeholder=Filter by note or ta..., type=text, rounded=True, outlined=True, dense=True, clearable=True]
E RunFilterButton [markers=BUTTON_RUNS_FILTER_COMPLETED, name=done_all, size=sm]
E Tooltip [text=Show completed runs...]
E Separator
E RefreshableContainer
E ScrollArea [id=runs-list-container, content-style=padding-right: 0;]
E Column
E Item [markers=SIDEBAR_RUN_ITEM:0:d377028e-954c-4afc-af45-6f14a512309d, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:0, text=he-tme (1.0.0-sl.4.4...]
E Label [text=6 seconds, from 12-0...]
E Row
E Chip [text=test_gui_tag1, model-value=True, clickable=True]
E Chip [text=test_gui_tag2, model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:1:1a3b4d9c-a465-4ae8-8515-73218f516556, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:1, text=he-tme (1.0.0-sl.4.4...]
E Label [text=6 seconds, from 12-0...]
E Row
E Chip [text=test_gui_cli_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:2:bf748284-3aa0-41e3-b11b-fa7e8a6dc434, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:2, text=he-tme (1.0.0-sl.4.4...]
E Label [text=5 seconds, from 12-0...]
E Row
E Chip [text=test_gui_tag1, model-value=True, clickable=True]
E Chip [text=test_gui_tag2, model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:3:2695e8ec-8ba3-462d-9d0c-499583189080, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:3, text=he-tme (1.0.0-sl.4.4...]
E Label [text=6 seconds, from 12-0...]
E Row
E Chip [text=test_gui_cli_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:4:aef14cbe-894a-4415-905c-eb0178417244, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [value=22, max=100, size=xl, show-value=True, track-color=grey-4]
E Icon [name=schedule]
E Tooltip [text=22 of 100 succeeded,...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:4, text=test-app (0.99.0)]
E Label [text=14 minutes, from 12-...]
E Row
E Chip [text=find_and_validate:12..., model-value=True, clickable=True]
E Chip [text=special, model-value=True, clickable=True]
E Chip [text=stress, model-value=True, clickable=True]
E Tooltip [text=Tags: stress_only, t...]
E Item [markers=SIDEBAR_RUN_ITEM:5:8f8f1b2c-3311-451d-ad5b-e4ade5647751, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:5, text=he-tme (1.0.0-sl.4.4...]
E Label [text=36 seconds, from 12-...]
E Row
E Chip [text=cli-test, model-value=True, clickable=True]
E Chip [text=further-tag, model-value=True, clickable=True]
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:6:9ed5647a-65ee-4bc5-9649-cfe0b15afb5e, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:6, text=he-tme (1.0.0-sl.4.4...]
E Label [text=30 seconds, from 12-...]
E Row
E Chip [text=cli-test, model-value=True, clickable=True]
E Chip [text=further-tag, model-value=True, clickable=True]
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:7:4c30ed41-4f33-4604-af4f-740b00367a72, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:7, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a second, from 12-01...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:8:cca04aaa-2966-4bc9-86ab-b3a28ad1868c, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:8, text=he-tme (1.0.0-sl.4.4...]
E Label [text=4 seconds, from 12-0...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:9:8b8b3b10-757e-41f6-9e6a-70bb855078a6, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:9, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a second, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:10:79e262b0-39a8-41c3-ac9e-d05eac9f39e9, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:10, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:11:b7e53b01-8e39-4424-ae51-c2f168ab68a0, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:11, text=he-tme (1.0.0-sl.4.4...]
E Label [text=5 seconds, from 12-0...]
E Row
E Chip [text=test_gui_tag1, model-value=True, clickable=True]
E Chip [text=test_gui_tag2, model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:12:d11b5db7-ad7a-4fa3-96ed-43789fea42f1, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:12, text=he-tme (1.0.0-sl.4.4...]
E Label [text=5 seconds, from 12-0...]
E Row
E Chip [text=test_gui_cli_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:13:669c13e9-94e8-4cc8-b117-8ef61565fbb7, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:13, text=he-tme (1.0.0-sl.4.4...]
E Label [text=2 seconds, from 12-0...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:14:a54fd206-e868-438d-aa1c-3364828c01fb, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:14, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:15:8be657d0-eafb-4bba-add6-3abe923450f4, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:15, text=he-tme (1.0.0-sl.4.4...]
E Label [text=5 seconds, from 12-0...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:16:dd47bc81-dc8c-4aae-a1d3-4780091d1975, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:16, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:17:35e6b203-9b17-4d35-8a23-1a4c513f9fb8, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:17, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a second, from 12-01...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:18:fca146a0-dac9-4f70-a370-b55187a6c174, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:18, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:19:c5da3c70-2931-4d97-95a0-464f09b7cab8, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:19, text=he-tme (1.0.0-sl.4.4...]
E Label [text=3 seconds, from 12-0...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:20:aa55a661-e07a-4f4c-992e-6ec5a07f422a, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:20, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:21:30a2f6b6-9d26-4e5d-90b6-b1c6aa682438, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=schedule]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:21, text=he-tme (1.0.0-sl.4.4...]
E Label [text=23 minutes, from 12-...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:22:c098b4f8-4f0c-435b-bb3d-d2cc0d01b49d, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:22, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:23:b9d61a18-0382-456b-9d26-e94ed03b1315, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=schedule]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:23, text=he-tme (1.0.0-sl.4.4...]
E Label [text=23 minutes, from 12-...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:24:95be0a99-74ca-41c3-bf69-673b150c3399, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:24, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:25:d5907e4a-71fa-4e9f-99a9-5ecc74cdd605, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:25, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a second, from 12-01...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:26:402c4dc9-9372-483d-a6ed-e18c283ff0be, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:26, text=he-tme (1.0.0-sl.4.4...]
E Label [text=4 seconds, from 12-0...]
E Row
E Chip [text=test_json_format_176..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:27:ac024dd9-e7c5-46b7-a90c-c9d8c0b034b4, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:27, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:28:d2e24c78-7603-462e-88e8-34547fa7311c, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=cancel]
E Tooltip [text=0 of 1 succeeded, st...]
E ItemSection
E Label [markers=LABEL_RUN_APPLICATION:28, text=he-tme (1.0.0-sl.4.4...]
E Label [text=a moment, from 12-01...]
E Row
E Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E Item [markers=SIDEBAR_RUN_ITEM:29:7f7621bb-f166-495a-afa3-17c7ae83c239, clickable=True]
E ItemSection [avatar=True]
E CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E Icon [name=schedule]
E Tooltip [text=0 of 1 succeeded, st...]
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E Label [markers=LABEL_RUN_APPLICATION:191, text=he-tme (1.0.0-sl.4.4...]
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E DarkMode
E Timer
E Timer
E QueryElement [selector=body, classes=['bg-aignostics-ligh...]
E q-layout
E Header [model-value=True, elevated=True, add_scroll_padding=True]
E Link [href=/, target=_self]
E Image [src=/assets/logo.png]
E Tooltip [text=Go to start page]
E Space
E Label [text=Error]
E Space
E DarkMode
E Button [icon=dark_mode, visible=False]
E RefreshableContainer
E Spinner [size=1em, thickness=5.0, flat=True]
E Button [icon=folder_special, flat=True]
E Tooltip [text=Open data directory...]
E Button [icon=menu, flat=True]
E Tooltip [text=Open menu]
E q-page-container
E q-page
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E Colors [primary=#1C1242, secondary=#B9B1DF, accent=#111B1E, dark=#1d1d1d1d, dark_page=#12121212, positive=#0CA57B, negative=#D4313C, info=#261C8D, warning=#FFCC00, customColors={'success': '#0CA57B...]
E DarkMode
E Timer
E Timer
E QueryElement [selector=body, classes=['bg-aignostics-ligh...]
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E Column
E Column
E Label [text=JavaScript did not r...]
E Code [content=Traceback (most rece..., content=Traceback (most rece...]
E Markdown [content=```python Traceback...]
E Button [icon=content_copy, round=True, flat=True, size=sm]
E Timer
E Column
E Html [content=<dotlottie-player sr...]
E RightDrawer [side=right]
E Column
E List
E Item [clickable=True]
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E Icon [name=biotech]
E ItemSection
E Label [text=Run Applications]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=image]
E ItemSection
E Label [text=Download Datasets]
E Space
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E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=visibility]
E ItemSection
E Label [text=QuPath Extension]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=difference]
E ItemSection
E Label [text=Marimo Extension]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=cloud]
E ItemSection
E Label [text=Manage Cloud Bucket]
E Item [clickable=True]
E ItemSection [avatar=True]
E RefreshableContainer
E ItemSection
E Label [text=Info and Settings]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=domain]
E ItemSection
E Link [markers=LINK_PLATFORM, text=Go to Console, href=https://platform.aig..., target=_blank]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=local_library]
E ItemSection
E Link [markers=LINK_DOCUMENTATION, text=Read The Docs, href=https://aignostics.r..., target=_blank]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=help]
E ItemSection
E Link [markers=LINK_DOCUMENTATION, text=Get Support, href=https://platform.aig..., target=_blank]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=check_circle]
E ItemSection
E Link [markers=LINK_DOCUMENTATION, text=Check Platform Statu..., href=https://status.aigno..., target=_blank]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=handshake]
E ItemSection
E Link [markers=LINK_ATTRIBUTIONS, text=Attributions, href=https://aignostics.r..., target=_blank]
E Footer [model-value=True]
E Row
E RefreshableContainer
E Link [href=/system, target=_self]
E Row
E Tooltip [text=Check Launchpad Stat...]
E Spinner [size=1em, thickness=5.0]
E Row
E Html [content=<iframe id="betterst...]
E Tooltip [text=Check Platform Statu...]
E Space
E Row
E Html [content=#x1F52C<a style="color: bl...]
E Tooltip [text=Visit GitHub reposit...]
E RightDrawer [model-value=True, side=right]
E Column
E List
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=biotech]
E ItemSection
E Label [text=Run Applications]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=image]
E ItemSection
E Label [text=Download Datasets]
E Space
E List
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=visibility]
E ItemSection
E Label [text=QuPath Extension]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=difference]
E ItemSection
E Label [text=Marimo Extension]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=cloud]
E ItemSection
E Label [text=Manage Cloud Bucket]
E Item [clickable=True]
E ItemSection [avatar=True]
E RefreshableContainer
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E ItemSection
E Label [text=Info and Settings]
E Item [clickable=True]
E ItemSection [avatar=True]
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E ItemSection
E Link [markers=LINK_PLATFORM, text=Go to Console, href=https://platform.aig..., target=_blank]
E Item [clickable=True]
E ItemSection [avatar=True]
E Icon [name=local_library]
E ItemSection
E Link [markers=LINK_DOCUMENTATION, text=Read The Docs, href=https://aignostics.r..., target=_blank]
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E ItemSection [avatar=True]
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E ItemSection
E Link [markers=LINK_DOCUMENTATION, text=Check Platform Statu..., href=https://status.aigno..., target=_blank]
E Item [clickable=True]
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E Row
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E Link [href=/system, target=_self]
E Row
E Tooltip [text=Check Launchpad Stat...]
E Icon [name=check_circle]
E Label [text=Launchpad is healthy]
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E Html [content=<iframe id="betterst...]
E Tooltip [text=Check Platform Statu...]
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E Html [content=#x1F52C<a style="color: bl...]
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..../test-3-13-9/lib/python3.13.../nicegui/testing/user.py:141: AssertionError

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[github-actions]

Claude finished @olivermeyer's task —— View job

---

PR #299 Review: JavaScript Timeout Fix ✅

Summary

This PR successfully fixes the NiceGUI drawer JavaScript timeout issue by reordering the initialization sequence. The implementation is architecturally sound and follows NiceGUI best practices.

---

✅ What's Good

1. Root Cause Fix

The PR correctly identifies and fixes the core issue: the drawer's JavaScript query was timing out (1s limit) when blocked by API calls. By creating the frame first with a loading state, the drawer initializes immediately.

2. Clean Implementation

• Creates frame with loading state first (lines 76-83)
• Shows content-area spinner while loading (lines 86-89)
• Loads data asynchronously using nicegui_run.io_bound() (line 92)
• Updates header via JavaScript after data loads (lines 129-140)
• Proper error handling with loading state cleanup (lines 94-111)

3. Good UX Improvements

• User sees immediate feedback ("Loading run...")
• Loading spinner in content area
• Graceful error handling with clear error messages

4. Follows Repository Standards

• ✅ Conventional commit: fix: resolve NiceGUI drawer JavaScript timeout on run results
• ✅ Maintains architecture: GUI layer properly uses Service layer
• ✅ Type hints maintained (Run | None, RunData)
• ✅ Proper async patterns with NiceGUI

---

⚠️ Issues Found

1. Test Failure (BLOCKING)

Location: tests/aignostics/application/gui_test.py:501

Issue: The test test_gui_run_results_pagination_show_more_button_hidden_when_few_results fails because it searches for f"Run {run_with_few_items.run_id}" but the new implementation:

1. Initially shows: "Loading run {run_id[:8]}..."
2. Then updates via JavaScript to: "Run of {app_id} ({version}) on {date}"

The test never sees the exact text "Run {full_run_id}" anymore.

Stack trace excerpt:

AssertionError: expected to see at least one element with marker=Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5 or content=Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5 on the page

Fix Required: Update the test to look for the new header format. The test should search for a pattern that will be present after the JavaScript update completes, such as:

• The application ID text
• The loading spinner completion
• A marker/element that's added after data loads

Suggested test change:

# Navigate to the run pageawaituser.open(f"/application/run/{run_with_few_items.run_id}")
# Wait for loading to complete by checking for the expansion element# which is only created after run_data is loaded (line 548 in implementation)awaituser.should_see("Run", retries=100) # More generic - matches the expansion textawaitsleep(1) # Give JavaScript time to update header# Alternative: wait for a specific element that only appears after loading# await user.should_see(marker="CODE_RUN_METADATA", retries=100)

Reproduce:

uv run pytest tests/aignostics/application/gui_test.py::test_gui_run_results_pagination_show_more_button_hidden_when_few_results -v

Verify Fix:

make lint && make test_integration

---

2. Coverage Drop (BLOCKING - 60% vs 80% required)

Issue: SonarQube reports 60% coverage on new code (required ≥ 80%)

The new code adds ~35 lines of logic:

• Loading state handling (lines 72-90)
• Run data loading with error handling (lines 92-111)
• JavaScript header update (lines 116-140)

Analysis: The failing test prevents coverage data from being collected for the success path. Once the test is fixed, coverage should improve. However, additional test coverage may be needed for:

• Error path when run.details() fails (line 105-111)
• JavaScript header update success/failure scenarios

Recommendation: After fixing the test, verify coverage with:

uv run pytest tests/aignostics/application/gui_test.py -v --cov=src/aignostics/application/_gui/_page_application_run_describe --cov-report=term-missing

---

📝 Suggestions (Non-Blocking)

1. Consider Adding Explicit Wait for JavaScript Completion

The JavaScript update (lines 129-140) happens asynchronously. In tests, there might be a race condition where the test checks for content before JavaScript updates the DOM.

Suggestion: Consider adding a small delay after the JavaScript runs or using a marker element that confirms the update completed:

# After JavaScript update, add a marker for testsawaitui.run_javascript(f""" const header = document.querySelector('header'); if (header) {{ const titleLabel = header.querySelector('.text-xl.font-bold'); if (titleLabel) {{ titleLabel.textContent = {new_title!r}; titleLabel.setAttribute('data-loaded', 'true'); // Test marker }} // ... rest of JavaScript }}""")

Then tests can wait for data-loaded="true" attribute.

2. Document the Loading State Pattern

This is a good pattern for avoiding NiceGUI timeouts. Consider adding a comment in src/aignostics/application/CLAUDE.md about this pattern for future reference:

### NiceGUI Drawer Timeout Prevention
When creating pages with drawers that make API calls:
1. Create the frame FIRST with a loading state
2. Make API calls AFTER frame initialization
3. Update UI elements via JavaScript or content replacement
This prevents the drawer's JavaScript queries from timing out (1s limit).

3. Minor Code Style

Line 108: Consider using loading_container.clear() instead of .delete() for consistency (you use .delete() on line 114 and .clear() on line 95). Both work, but consistency aids readability.

---

🔍 Architectural Compliance

✅ Modulith Pattern: GUI layer properly depends on Service layer only
✅ Async Patterns: Correct use of nicegui_run.io_bound() for blocking operations
✅ Error Handling: Proper try/except with user-friendly error messages
✅ Type Safety: Type hints maintained throughout (Run | None, RunData)
✅ No Breaking Changes: Internal UI change only, no API modifications

---

📋 Required Actions Before Merge

BLOCKING Issues (Must Fix):

1. Fix the failing test in gui_test.py:501

   • Update test to match new header text pattern
   • OR wait for a marker element that appears after data loads
   • OR use the expansion element as a loading indicator

2. Verify test coverage reaches ≥ 80%

   • Run: make test after fixing the test
   • Check coverage report for the modified file

Commands to Run:

# 1. Fix the test first (manual code change needed)# Edit: tests/aignostics/application/gui_test.py# 2. Verify linting passes
make lint
# 3. Run integration tests
make test_integration
# 4. Check coverage
uv run pytest tests/aignostics/application/ --cov=src/aignostics/application/_gui --cov-report=term-missing
# 5. Full test suite
make test

---

🎯 Conclusion

This is a well-implemented fix for a real UX issue. The architecture is sound and follows repository standards. The main blocker is the test that needs updating to match the new loading sequence.

Estimated effort to fix: ~10 minutes (update one test assertion)

Once the test is fixed and passes, this PR should be good to merge. Excellent work identifying and solving the root cause of the JavaScript timeout issue! 🚀

---

| View PR

[github-actions]

Claude finished @olivermeyer's task —— View job

---

PR #299 Review: JavaScript Timeout Fix

I've completed my review of the changes to fix the NiceGUI drawer JavaScript timeout issue.

Todo List

• Read repository CLAUDE.md documentation
• Review the modified file changes
• Analyze the failing test
• Check architectural compliance
• Verify coverage issues
• Provide comprehensive review feedback

---

🎯 Summary

This PR successfully addresses the NiceGUI drawer JavaScript timeout issue by reordering the initialization sequence. The root cause fix is architecturally sound and follows NiceGUI best practices. However, there is one critical blocking issue that must be resolved before merge.

---

❌ BLOCKING ISSUES (Must Fix)

1. Test Failure - Text Assertion Mismatch

Location: tests/aignostics/application/gui_test.py:501

Issue: The test test_gui_run_results_pagination_show_more_button_hidden_when_few_results is failing because it expects to see "Run {full_run_id}" but the new implementation never displays that exact text.

What Changed:

# OLD: Frame created after run_data loaded, title was full run_idawait_frame(navigation_title=f"Run {run_id}", ...)
# NEW: Frame created immediately with loading stateawait_frame(navigation_title=f"Loading run {run_id[:8]}...", ...) # Line 77# Then later, JavaScript updates header to run details (lines 140-151)new_title=f"Run of {run_data.application_id} ({run_data.version_number}) on {date}"

Test Expectation (line 501):

awaituser.should_see(f"Run {run_with_few_items.run_id}", retries=100)

Why It Fails: The test is looking for "Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5" (example), but:

1. Initially, the page shows: "Loading run bbc7b3a0..." (only first 8 chars)
2. After loading, JavaScript updates to: "Run of he-tme (1.0.0-sl.4.4.0) on 12-01 14:35"

The full run ID is never displayed in the header anymore.

Required Fix:

Option A (Recommended): Update test to wait for loading completion by checking for a stable element:

# Navigate to the run pageawaituser.open(f"/application/run/{run_with_few_items.run_id}")
# Wait for the expansion panel to be created (line 105 in implementation)# This element only appears after run_data is loadedawaituser.should_see(marker="CODE_RUN_METADATA", retries=100)
# Alternative: Wait for the "Run" expansion text which appears after loading# await user.should_see("Run", retries=100)

Option B: Update test to match the new header format:

# This is less stable because the exact text depends on app_id/version/dateawaituser.should_see(f"Run of {HETA_APPLICATION_ID}", retries=100)

Reproduce:

uv run pytest tests/aignostics/application/gui_test.py::test_gui_run_results_pagination_show_more_button_hidden_when_few_results -v

Verify Fix:

make lint && make test_integration

---

2. Test Coverage - 56% vs 80% Required

Issue: SonarQube reports 56% coverage on new code (requires ≥80%)

Root Cause: The failing test prevents coverage data from being collected for the success path in the new loading sequence.

Lines Likely Uncovered (need verification after test fix):

• Loading state rendering (lines 86-89)
• Successful run data loading (lines 92-93, 117)
• JavaScript header update (lines 140-151)
• Error handling path when run.details() fails (lines 118-122)

Action Required:

1. Fix the test first (blocking issue chore(deps): Bump actions/upload-artifact from 4.6.1 to 4.6.2 #1)
2. Run coverage report:

   uv run pytest tests/aignostics/application/gui_test.py -v \
   --cov=src/aignostics/application/_gui/_page_application_run_describe \
   --cov-report=term-missing

3. If coverage still < 80%, add test cases for:
   • Error handling when run.details() raises an exception
   • Verify loading spinner is shown during data fetch
   • Verify JavaScript header update executes successfully

---

✅ What's Excellent

1. Root Cause Analysis & Fix

The PR correctly identifies the problem: NiceGUI drawer's JavaScript query times out (1s limit) when blocked by slow API calls. The fix is elegant:

• Create frame first with loading state (lines 72-83)
• Make API calls after frame initialization (line 92, 117)
• Update UI via JavaScript once data arrives (lines 140-151)

This follows NiceGUI best practices for handling async operations that might block the UI thread.

2. Clean Implementation

• Loading state: Clear loading message with spinner (lines 86-89)
• Error handling: Proper try/except with cleanup (lines 116-122)
• Async patterns: Correct use of nicegui_run.io_bound() for blocking operations (line 92)
• Comment documentation: Excellent inline comment explaining the timeout issue (lines 72-75)

3. Maintains Code Architecture

• ✅ GUI layer properly uses Service layer only
• ✅ No architectural violations
• ✅ Type hints maintained (Run | None, RunData)
• ✅ No breaking changes to API

4. Good UX

• User sees immediate feedback: "Loading run details..."
• Loading spinner in content area
• Graceful error handling with clear error messages
• No change to final rendered state (same user experience once loaded)

---

⚠️ Suggestions (Non-Blocking)

1. Consider Race Condition with JavaScript Update

Location: Lines 140-151

Issue: The JavaScript update happens asynchronously. In rare cases, if the DOM hasn't fully rendered, the query selectors might fail silently.

Suggestion: Add error handling or defensive checks:

awaitui.run_javascript(f""" const header = document.querySelector('header'); if (!header) {{ console.warn('Header not found during update'); return; }} const titleLabel = header.querySelector('.text-xl.font-bold'); if (titleLabel) titleLabel.textContent = {new_title!r}; const icon = header.querySelector('.text-4xl'); if (icon) {{ icon.textContent = {icon!r}; icon.style.color = {color!r}; }}""")

2. Document the Pattern

This is a valuable pattern for avoiding NiceGUI timeouts. Consider adding it to module documentation.

Suggested addition to src/aignostics/application/CLAUDE.md:

### NiceGUI Drawer Timeout Prevention
When creating pages with drawers that make API calls:
1. Create the frame FIRST with a loading state
2. Make API calls AFTER frame initialization
3. Update UI elements via JavaScript or content replacement
This prevents the drawer's JavaScript queries from timing out (1s limit).
**Example**: See `_page_application_run_describe.py` lines 72-151

3. Minor: Comment Precision

Location: Line 113

Current comment:

# Note: We call run.details() synchronously because:# 1. The frame is already created, so the drawer JS query won't timeout# 2. Using io_bound for bound instance methods can cause issues in test environments

Suggestion: The call is actually still async (it's awaited on line 117), just not wrapped in io_bound(). Consider:

# Note: We call run.details() directly (not via io_bound) because:# 1. The frame is already created, so drawer JS queries won't timeout# 2. This is a bound method call that doesn't benefit from io_bound wrapping# 3. Avoids potential pickling issues with bound methods in test environments

---

🔍 Code Quality Checks

Linting & Type Checking

Cannot verify without running make lint, but based on code inspection:

• ✅ Type hints appear complete and correct
• ✅ Import structure follows repository conventions
• ✅ Line lengths appear within 120 char limit
• ✅ No obvious linting issues

Verify with:

make lint

Architecture Compliance

• ✅ Modulith Pattern: GUI layer correctly depends only on Service layer
• ✅ Async Patterns: Proper use of nicegui_run.io_bound() and await
• ✅ Error Handling: Try/except blocks with user-friendly messages
• ✅ No Circular Dependencies: No new imports that would violate module boundaries

Test Markers

The failing test has correct markers:

@pytest.mark.integration@pytest.mark.sequential

This is appropriate for GUI tests that must run sequentially.

---

📋 Required Actions Before Merge

CRITICAL (Blocking):

1. Fix the failing test (Estimated: 5 minutes)

   # Edit: tests/aignostics/application/gui_test.py:501# Change line 501 from:
   await user.should_see(f"Run {run_with_few_items.run_id}", retries=100)
   # To (Option A - Recommended):
   await user.should_see(marker="CODE_RUN_METADATA", retries=100)
   # Or (Option B):
   await user.should_see("Run of", retries=100) # Matches new header format

2. Verify test passes

   uv run pytest tests/aignostics/application/gui_test.py::test_gui_run_results_pagination_show_more_button_hidden_when_few_results -v

3. Check coverage (after test fix)

   uv run pytest tests/aignostics/application/ \
   --cov=src/aignostics/application/_gui \
   --cov-report=term-missing

4. Run full test suite

   make test_integration

5. Verify linting

   make lint

SUGGESTED (Non-blocking):

• Add defensive checks to JavaScript update (Suggestion chore(deps): Bump actions/upload-artifact from 4.6.1 to 4.6.2 #1)
• Document the pattern in application/CLAUDE.md (Suggestion chore(deps): update actions/upload-artifact action to v4.6.2 #2)
• Improve comment clarity (Suggestion chore(deps): update python docker tag to v3.13 - autoclosed #3)

---

🎯 Conclusion

This PR implements an excellent solution to a real UX issue. The architecture is sound, the code is clean, and the approach follows NiceGUI best practices. The only blocker is updating the test assertion to match the new loading sequence.

Estimated effort to unblock: ~5-10 minutes (update one test assertion)

Once the test is fixed and coverage is verified ≥80%, this PR will be ready to merge. Outstanding work identifying and solving the root cause of the JavaScript timeout! 🚀

---

Impact Summary:

• ✅ Fixes: JavaScript timeout in NiceGUI drawer
• ✅ Improves: User experience with loading feedback
• ✅ Maintains: Architectural integrity
• ❌ Breaks: One test assertion (easy fix)
• ⚠️ Coverage: Needs verification after test fix

---

[github-actions]

Claude finished @olivermeyer's task —— View job

---

PR #299 Review: JavaScript Timeout Fix

I've completed my comprehensive review of the changes to fix the NiceGUI drawer JavaScript timeout issue.

Todo List

• Read repository CLAUDE.md documentation
• Read the changed file and understand the fix
• Analyze the failing test
• Check test markers and coverage
• Verify architecture compliance
• Check code quality (linting)
• Provide comprehensive review with actionable items

---

🎯 Executive Summary

This PR successfully addresses a NiceGUI drawer JavaScript timeout issue with a well-implemented fix. The root cause is correctly identified and the solution follows NiceGUI best practices. However, there is ONE CRITICAL blocking issue that must be resolved before merge.

Status: ❌ BLOCKING - Test failure must be fixed
Linting: ✅ PASSING - All checks passed
Architecture: ✅ COMPLIANT - No violations detected
Test Markers: ✅ CORRECT - Integration marker present

---

❌ BLOCKING ISSUE (Must Fix Before Merge)

Test Failure - Text Assertion Mismatch

Location: tests/aignostics/application/gui_test.py:501

Test: test_gui_run_results_pagination_show_more_button_hidden_when_few_results

Root Cause: The test expects to see "Run {full_run_id}" (e.g., "Run bbc7b3a0-e744-48fd-9e7d-9ee73ad83cb5"), but the new implementation never displays that exact text.

What Changed:

# OLD: Frame created after run_data loaded, title was full run_idawait_frame(navigation_title=f"Run {run_id}", ...)
# NEW: Frame created immediately with loading state await_frame(navigation_title=f"Loading run {run_id[:8]}...", ...) # Line 77# Then later, JavaScript updates header to:new_title=f"Run of {run_data.application_id} ({run_data.version_number}) on {date}"# Example: "Run of he-tme (1.0.0-sl.4.4.0) on 12-01 14:35"

Test Expectation (line 501):

awaituser.should_see(f"Run {run_with_few_items.run_id}", retries=100)

Why It Fails:

1. Initially: "Loading run bbc7b3a0..." (only first 8 chars)
2. After loading: "Run of he-tme (1.0.0-sl.4.4.0) on 12-01 14:35"
3. The full run ID is never shown in the header

---

✅ Required Fix

Update the test assertion to wait for a stable element that appears after loading completes.

Option A (Recommended - Most Robust):

# Line 500-501, replace:awaituser.open(f"/application/run/{run_with_few_items.run_id}")
awaituser.should_see(f"Run {run_with_few_items.run_id}", retries=100)
# With:awaituser.open(f"/application/run/{run_with_few_items.run_id}")
# Wait for the expansion panel to be created (only appears after run_data loads)awaituser.should_see(marker="CODE_RUN_METADATA", retries=100)

Why this works: The CODE_RUN_METADATA marker is only added after run_data is successfully loaded (line 593 in the implementation). This is a reliable indicator that the page finished loading.

Option B (Alternative - Wait for New Header Format):

# Line 501, replace:awaituser.should_see(f"Run {run_with_few_items.run_id}", retries=100)
# With:awaituser.should_see("Run of he-tme", retries=100) # Matches new header format

Why this is less ideal: The exact application name and version may vary, making this test less flexible.

---

Verify the Fix

# 1. Apply the fix to tests/aignostics/application/gui_test.py# 2. Run the specific failing test
uv run pytest tests/aignostics/application/gui_test.py::test_gui_run_results_pagination_show_more_button_hidden_when_few_results -v
# 3. Run all GUI integration tests
uv run pytest tests/aignostics/application/gui_test.py -m integration -v
# 4. Verify linting still passes
make lint
# 5. Check coverage (should improve after test passes)
uv run pytest tests/aignostics/application/ --cov=src/aignostics/application/_gui --cov-report=term-missing

---

Additional Tests That May Need Updates

I found 4 other tests that look for run-related text:

1. ✅ Line 306: await user.should_see(f"Run of he-tme ({version})", ...) - Already correct! Uses new format.
2. ⚠️Line 386: await user.should_see(f"Run {run.run_id}", retries=100) - May fail, needs investigation
3. ❌ Line 501: await user.should_see(f"Run {run_with_few_items.run_id}", retries=100) - Fails (reported by CI)
4. ⚠️Line 556: await user.should_see(f"Run {run_with_many_items.run_id}", retries=100) - May fail, needs investigation

Action Required: After fixing line 501, verify lines 386 and 556 don't have the same issue.

---

⚠️ Coverage Issue (56% vs 80% Required)

Current: 56% coverage on new code
Required: ≥80% coverage

Root Cause: The failing test prevents coverage data from being collected for the success path.

Expected Resolution: Once the test is fixed, coverage should improve significantly because the test will exercise:

• Loading state rendering (lines 86-89)
• Successful run data loading (lines 92-93, 117)
• JavaScript header update (lines 140-151)

Action After Test Fix: Run coverage report and verify it reaches ≥80%:

uv run pytest tests/aignostics/application/gui_test.py -v \
--cov=src/aignostics/application/_gui/_page_application_run_describe \
--cov-report=term-missing

---

✅ What's Excellent About This PR

1. Root Cause Analysis is Spot-On

The PR correctly identifies the problem with excellent documentation:

# Lines 72-75 - Outstanding comment explaining the issue# Create frame FIRST with a loading state to avoid NiceGUI drawer JS timeout.# The drawer component queries JavaScript for its state, and if the main thread# is blocked by API calls (like run.details()), the JS query times out after 1s.# By creating the frame before any blocking calls, the drawer initializes properly.

This is medical device software where such clear explanations are critical for regulatory compliance and future maintainability.

2. Clean Implementation

The fix follows a clear sequence:

1. Create frame immediately with loading state (lines 76-83) ✅
2. Show loading spinner in content area (lines 86-89) ✅
3. Load data asynchronously via nicegui_run.io_bound() (line 92) ✅
4. Update header via JavaScript once data arrives (lines 140-151) ✅
5. Graceful error handling with proper cleanup (lines 118-122) ✅

3. Good UX Improvements

• Immediate feedback: "Loading run {id[:8]}..." tells users the page is working
• Visual indicator: Loading spinner with descriptive text
• Smooth transition: JavaScript updates header without page reload
• Error states: Clear error messages with icons

4. Architecture Compliance

✅ Modulith Pattern: GUI layer properly uses Service layer only
✅ Async Patterns: Correct use of nicegui_run.io_bound() for blocking operations
✅ Error Handling: Try/except blocks with user-friendly messages
✅ Type Safety: Type hints maintained (Run | None, RunData)
✅ No Breaking Changes: Internal UI change only, no API modifications

5. Code Quality

✅ Linting: All checks passed (ruff, pyright, mypy)
✅ Type Hints: Complete and correct throughout
✅ Import Organization: Follows repository standards
✅ Line Length: Within 120 char limit
✅ Docstrings: Maintained for all functions

6. Test Markers

✅ Correct Markers: Test has @pytest.mark.integration and @pytest.mark.sequential
✅ Timeout Set: @pytest.mark.timeout(timeout=60) appropriate for GUI test
✅ Flaky Decorator: @pytest.mark.flaky(retries=2, delay=5) handles GUI test instability
✅ Platform Skip: Handles macOS ARM64 Python 3.13 issues

---

📝 Suggestions (Non-Blocking)

1. Consider Adding Defensive Checks to JavaScript Update

Location: Lines 140-151

Suggestion: Add error handling for edge cases:

awaitui.run_javascript(f""" const header = document.querySelector('header'); if (!header) {{ console.warn('Header not found during update'); return; }} const titleLabel = header.querySelector('.text-xl.font-bold'); if (titleLabel) {{ titleLabel.textContent = {new_title!r}; }} else {{ console.warn('Title label not found in header'); }} const icon = header.querySelector('.text-4xl'); if (icon) {{ icon.textContent = {icon!r}; icon.style.color = {color!r}; }} else {{ console.warn('Icon not found in header'); }}""")

Why: In rare cases where DOM hasn't fully rendered, this prevents silent failures and aids debugging.

2. Document the Pattern for Future Reference

Suggestion: Add this pattern to src/aignostics/application/CLAUDE.md:

### NiceGUI Drawer Timeout Prevention
When creating pages with drawers that make API calls:
1. Create the frame FIRST with a loading state
2. Make API calls AFTER frame initialization
3. Update UI elements via JavaScript or content replacement
This prevents the drawer's JavaScript queries from timing out (1s limit).
**Example**: See `_page_application_run_describe.py` lines 72-151

Why: This is a valuable pattern that other GUI pages might benefit from. Medical device software benefits from documented patterns for consistency.

3. Minor Comment Precision

Location: Line 113

Current:

# Note: We call run.details() synchronously because:

Suggestion:

# Note: We call run.details() directly (not wrapped in io_bound) because:

Why: The call is still awaited (line 117), so it's technically async. The key distinction is it's not wrapped in io_bound(). This improves clarity.

---

📋 Required Actions Before Merge

CRITICAL (Blocking):

1. ✅ Fix the failing test (Estimated: 5 minutes)

   # Edit: tests/aignostics/application/gui_test.py:501# Change:
   await user.should_see(f"Run {run_with_few_items.run_id}", retries=100)
   # To:
   await user.should_see(marker="CODE_RUN_METADATA", retries=100)

2. ✅ Verify other tests don't have the same issue

   # Check lines 386 and 556 in the same file
   uv run pytest tests/aignostics/application/gui_test.py -m integration -v

3. ✅ Verify test passes

   uv run pytest tests/aignostics/application/gui_test.py::test_gui_run_results_pagination_show_more_button_hidden_when_few_results -v

4. ✅ Check coverage (after test fix)

   uv run pytest tests/aignostics/application/ \
   --cov=src/aignostics/application/_gui \
   --cov-report=term-missing
   # Verify coverage ≥80%

5. ✅ Run full integration test suite

   make test_integration

6. ✅ Verify linting (already passed, but verify after changes)

   make lint

SUGGESTED (Non-blocking):

• Add defensive checks to JavaScript update (Suggestion chore(deps): Bump actions/upload-artifact from 4.6.1 to 4.6.2 #1)
• Document the pattern in application/CLAUDE.md (Suggestion chore(deps): update actions/upload-artifact action to v4.6.2 #2)
• Improve comment clarity (Suggestion chore(deps): update python docker tag to v3.13 - autoclosed #3)

---

🎯 Conclusion

This PR implements an excellent solution to a real UX issue. The architecture is sound, the code is clean, and the approach follows NiceGUI best practices. The only blocker is updating one test assertion (and potentially two others) to match the new loading sequence.

Estimated effort to unblock: ~10 minutes (update 1-3 test assertions)

Once the tests are fixed and coverage is verified ≥80%, this PR will be ready to merge. Outstanding work identifying and solving the root cause of the JavaScript timeout! 🚀

---

Impact Summary:

• ✅ Fixes: JavaScript timeout in NiceGUI drawer
• ✅ Improves: User experience with loading feedback
• ✅ Maintains: Architectural integrity
• ❌ Breaks: 1-3 test assertions (easy fix)
• ⚠️ Coverage: Needs verification after test fix (expect improvement to ≥80%)

---

Compliance Note: This is medical device software under FDA/MDR regulatory requirements. The clear documentation of the timeout issue and fix demonstrates the high standards required for such systems. Excellent attention to detail!

---

[sonarqubecloud]

Quality Gate failed

Failed conditions
55.9% Coverage on New Code (required ≥ 80%)

See analysis details on SonarQube Cloud