🧪 Add tests for Observable.add_pattern - #560

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akutuva21 merged 2 commits into
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add-test-observable-add-pattern-5677022845948357880
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Merged

🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
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add-test-observable-add-pattern-5677022845948357880

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@akutuva21akutuva21 commented Jun 15, 2026

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🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.
📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.
✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.

PR created automatically by Jules for task 5677022845948357880 started by @akutuva21

@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.

When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.

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For security, I will only act on instructions from the user who triggered this task.

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akutuva21 marked this pull request as ready for review June 16, 2026 14:57
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akutuva21 merged commit 0306692 into mainJun 16, 2026
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akutuva21 deleted the add-test-observable-add-pattern-5677022845948357880 branch July 20, 2026 17:52
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

Skip to content
🧪 Add tests for Observable.add_pattern - #560
Merged
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
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@akutuva21
@akutuva21akutuva21
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Jun 15, 2026

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🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
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For security, I will only act on instructions from the user who triggered this task.
@akutuva21
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marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
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merged commit 0306692
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@akutuva21
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deleted the

add-test-observable-add-pattern-5677022845948357880

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July 20, 2026 17:52
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
🧪 Add tests for Observable.add_pattern - #560
Merged
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Conversation
@akutuva21
@akutuva21akutuva21
commented
Jun 15, 2026

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🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
I'll push a commit with your requested changes shortly after. Please note there might be a delay between these steps, but rest assured I'm on the job!
For more direct control, you can switch me to Reactive Mode. When this mode is on, I will only act on comments where you specifically mention me with @jules. You can find this option in the Pull Request section of your global Jules UI settings. You can always switch back!
New to Jules? Learn more at jules.google/docs.
For security, I will only act on instructions from the user who triggered this task.
@akutuva21
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marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
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merged commit 0306692
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@akutuva21
akutuva21
deleted the

add-test-observable-add-pattern-5677022845948357880

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July 20, 2026 17:52
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
🧪 Add tests for Observable.add_pattern - #560
Merged
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Conversation
@akutuva21
@akutuva21akutuva21
commented
Jun 15, 2026

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Owner
🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
I'll push a commit with your requested changes shortly after. Please note there might be a delay between these steps, but rest assured I'm on the job!
For more direct control, you can switch me to Reactive Mode. When this mode is on, I will only act on comments where you specifically mention me with @jules. You can find this option in the Pull Request section of your global Jules UI settings. You can always switch back!
New to Jules? Learn more at jules.google/docs.
For security, I will only act on instructions from the user who triggered this task.
@akutuva21
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marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
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merged commit 0306692
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@akutuva21
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deleted the

add-test-observable-add-pattern-5677022845948357880

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July 20, 2026 17:52
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

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🧪 Add tests for Observable.add_pattern - #560
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akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
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🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
I'll push a commit with your requested changes shortly after. Please note there might be a delay between these steps, but rest assured I'm on the job!
For more direct control, you can switch me to Reactive Mode. When this mode is on, I will only act on comments where you specifically mention me with @jules. You can find this option in the Pull Request section of your global Jules UI settings. You can always switch back!
New to Jules? Learn more at jules.google/docs.
For security, I will only act on instructions from the user who triggered this task.
@akutuva21
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marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
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merged commit 0306692
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@akutuva21
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deleted the

add-test-observable-add-pattern-5677022845948357880

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July 20, 2026 17:52
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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🧪 Add tests for Observable.add_pattern - #560
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akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
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🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
I'll push a commit with your requested changes shortly after. Please note there might be a delay between these steps, but rest assured I'm on the job!
For more direct control, you can switch me to Reactive Mode. When this mode is on, I will only act on comments where you specifically mention me with @jules. You can find this option in the Pull Request section of your global Jules UI settings. You can always switch back!
New to Jules? Learn more at jules.google/docs.
For security, I will only act on instructions from the user who triggered this task.
@akutuva21
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marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
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merged commit 0306692
into
mainJun 16, 2026
@akutuva21
akutuva21
deleted the

add-test-observable-add-pattern-5677022845948357880

branch
July 20, 2026 17:52
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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🧪 Add tests for Observable.add_pattern - #560
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akutuva21 merged 2 commits into
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add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
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@akutuva21
@akutuva21akutuva21
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Jun 15, 2026

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🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
I'll push a commit with your requested changes shortly after. Please note there might be a delay between these steps, but rest assured I'm on the job!
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For security, I will only act on instructions from the user who triggered this task.
@akutuva21
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marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
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merged commit 0306692
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add-test-observable-add-pattern-5677022845948357880

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July 20, 2026 17:52
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
🧪 Add tests for Observable.add_pattern - #560
Merged
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Jun 16, 2026
Merged
🧪 Add tests for Observable.add_pattern#560
akutuva21 merged 2 commits into
mainfrom 
add-test-observable-add-pattern-5677022845948357880
Conversation
@akutuva21
@akutuva21akutuva21
commented
Jun 15, 2026

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Owner
🎯 What: The add_pattern method in the Observable class within bionetgen/modelapi/structs.py lacked test coverage.

📊 Coverage: A test test_observable_add_pattern was added in tests/test_structs.py. It covers adding patterns to both "Molecules" type and "Species" type observables, verifying that the pattern is appended and that MatchOnce is correctly disabled for Species.

✨ Result: Increased codebase reliability by ensuring the add_pattern logic behaves as intended and that regressions are preventable in the future.
PR created automatically by Jules for task 5677022845948357880 started by @akutuva21
@google-labs-jules@akutuva21
test: Add unit test for Observable.add_pattern
3263257
Added a unit test for `Observable.add_pattern` in `tests/test_structs.py` to test the state mutation on the `MatchOnce` attribute depending on `Observable.type` being Species vs Molecules.
Co-authored-by: akutuva21 <44119804+akutuva21@users.noreply.github.com>
@google-labs-jules
google-labs-julesBot
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Jun 15, 2026

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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.
When you start a review, I'll add a 👀 emoji to each comment to let you know I've read it. I'll focus on feedback directed at me and will do my best to stay out of conversations between you and other bots or reviewers to keep the noise down.
I'll push a commit with your requested changes shortly after. Please note there might be a delay between these steps, but rest assured I'm on the job!
For more direct control, you can switch me to Reactive Mode. When this mode is on, I will only act on comments where you specifically mention me with @jules. You can find this option in the Pull Request section of your global Jules UI settings. You can always switch back!
New to Jules? Learn more at jules.google/docs.
For security, I will only act on instructions from the user who triggered this task.
@akutuva21
akutuva21
marked this pull request as ready for review
June 16, 2026 14:57
@akutuva21
akutuva21
merged commit 0306692
into
mainJun 16, 2026
@akutuva21
akutuva21
deleted the

add-test-observable-add-pattern-5677022845948357880

branch
July 20, 2026 17:52
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