ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
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test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
test-r-versionsGithub Actions
test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all
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}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Skip to content

ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
test-r-linux-as-cranGithub Actions
test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
test-r-versionsGithub Actions
test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
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thisisnic:ARROW-14850_dependency_source

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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
test-r-linux-as-cranGithub Actions
test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
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test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

@thisisnic

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
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test-r-offline-maximalGithub Actions
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test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
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test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content

ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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@github-actions crossbow -g r

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
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test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
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test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

@thisisnic

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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thisisnic:ARROW-14850_dependency_source
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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
thisisnic wants to merge 3 commits into
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thisisnic:ARROW-14850_dependency_source

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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
test-r-linux-as-cranGithub Actions
test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
test-r-versionsGithub Actions
test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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thisisnic wants to merge 3 commits into
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thisisnic:ARROW-14850_dependency_source
Closed

ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
thisisnic wants to merge 3 commits into
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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
test-r-linux-as-cranGithub Actions
test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
test-r-versionsGithub Actions
test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

@thisisnic

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

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ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO - #11881

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ARROW-14850: [R] Update ARROW_DEPENDENCY_SOURCE to default to AUTO#11881
thisisnic wants to merge 3 commits into
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thisisnic:ARROW-14850_dependency_source

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@github-actions crossbow submit all

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Unable to match any tasks for `all`
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549029093```

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@github-actions crossbow -g r

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No such option: -g
The Archery job run can be found at: https://github.com/apache/arrow/actions/runs/1549034406```

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@github-actions crossbow submit -g r

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Revision: 1938ed9

Submitted crossbow builds: ursacomputing/crossbow @ actions-1256

TaskStatus
conda-linux-gcc-py36-cpu-r40Azure
conda-linux-gcc-py37-cpu-r41Azure
conda-osx-clang-py36-r40Azure
conda-osx-clang-py37-r41Azure
conda-win-vs2017-py36-r40Azure
conda-win-vs2017-py37-r41Azure
homebrew-r-autobrewGithub Actions
test-fedora-r-clang-sanitizerAzure
test-r-arrow-backwards-compatibilityGithub Actions
test-r-depsource-bundledAzure
test-r-depsource-systemGithub Actions
test-r-devdocsGithub Actions
test-r-gcc-11Github Actions
test-r-install-localGithub Actions
test-r-linux-as-cranGithub Actions
test-r-linux-rchkGithub Actions
test-r-linux-valgrindAzure
test-r-minimal-buildAzure
test-r-offline-maximalGithub Actions
test-r-offline-minimalAzure
test-r-rhub-debian-gcc-devel-lto-latestAzure
test-r-rhub-ubuntu-gcc-release-latestAzure
test-r-rocker-r-base-latestAzure
test-r-rstudio-r-base-4.1-centos7-devtoolset-8Azure
test-r-rstudio-r-base-4.1-centos8Azure
test-r-rstudio-r-base-4.1-focalAzure
test-r-rstudio-r-base-4.1-opensuse15Azure
test-r-rstudio-r-base-4.1-opensuse42Azure
test-r-ubuntu-21.04Github Actions
test-r-versionsGithub Actions
test-ubuntu-18.04-r-sanitizerAzure

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

Comment threadr/configure
if [ "${ARROW_DEPENDENCY_SOURCE}" = "" ]; then
# TODO: BUNDLED is still default for now, but we plan to change it to AUTO
ARROW_DEPENDENCY_SOURCE=BUNDLED; export ARROW_DEPENDENCY_SOURCE
ARROW_DEPENDENCY_SOURCE=AUTO; export ARROW_DEPENDENCY_SOURCE

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(Can't leave this comment below but) on L162, we should revise the message, maybe just

echo "**** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED"

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Done!

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The other thing we should do, if you haven't already, is document how to install all of the possible dependencies with system packages, which ones can't be installed as system packages, etc. This may be general C++ documentation, but we may also want an R-flavored version since we don't deal with all of the possible C++ dependencies in the R package (some are for features we don't enable, some are test/dev dependencies, etc.). Maybe the docs just start by pointing at ci/docker and all of the cpp docker files there: they install dependencies, set ARROW_DEPENDENCY_SOURCE=SYSTEM, and then also set a few other dependency sources as BUNDLED. Some dockerfiles even have comments explaining why (insufficient version, etc.).

OK, will be sure to cover this in #11521

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This looks good (and will be especially good to check this in CI for a bit before the release).

I've looked through the build logs and both the bundled and system ones seems to be doing what we expect.

@ursabot

ursabot commented Dec 8, 2021

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Benchmark runs are scheduled for baseline = 392a25f and contender = 04ed72d. 04ed72d is a master commit associated with this PR. Results will be available as each benchmark for each run completes.
Conbench compare runs links:
[Finished ⬇️0.0% ⬆️0.0%] ec2-t3-xlarge-us-east-2
[Finished ⬇️3.7% ⬆️0.0%] ursa-i9-9960x
[Finished ⬇️0.04% ⬆️0.09%] ursa-thinkcentre-m75q
Supported benchmarks:
ec2-t3-xlarge-us-east-2: Supported benchmark langs: Python. Runs only benchmarks with cloud = True
ursa-i9-9960x: Supported benchmark langs: Python, R, JavaScript
ursa-thinkcentre-m75q: Supported benchmark langs: C++, Java

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