ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

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arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
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arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

@arw2019
arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
@arw2019
arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

@arw2019

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

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arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
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arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

@arw2019

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

@jorisvandenbossche

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

@arw2019
arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
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arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

@arw2019
arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
@arw2019
arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

@jorisvandenbosschejorisvandenbossche left a comment

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

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arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
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arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

@arw2019

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

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arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
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arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

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Thanks @arw2019 !

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Thanks @jorisvandenbossche for reviewing!

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table - #8044

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ARROW-7663: [Python] Raise better error message when passing mixed-type (int/string) Pandas dataframe to pyarrow Table#8044
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@arw2019arw2019 commented Aug 25, 2020

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This PR homogenizes error messages for mixed-type Pandas inputs to pa.Table.

The message for Pandas column with int followed by string is now

In [2]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to int', 'Conversion failed for column a with type object')

the same as for double followed by string:

In [3]: table = pa.Table.from_pandas(pd.DataFrame({'a': [ 19.0, 'a']})) (... traceback...)
ArrowInvalid: ('Could not convert a with type str: tried to convert to double', 'Conversion failed for column a with type object')

As a side effect, this snippet [xref #5866, ARROW-7168] now throws an ArrowInvalid (has been FutureWarning since 0.16):

In [8]: cat = pd.Categorical.from_codes(np.array([0, 1], dtype='int8'), np.array(['a', 'b'], dtype=object)) ...: typ = pa.dictionary(index_type=pa.int8(), value_type=pa.int64()) ...: result = pa.array(cat, type=typ) (... traceback...)
ArrowInvalid: Could not convert a with type str: tried to convert to int

Finally, this does break a test [xref #4484, ARROW-4036] - see code comment

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arw2019 marked this pull request as draft August 25, 2020 04:31
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We lose the the more specific traceback and ZeroDivisionError message, in favor of

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/0In [12]: pa.array([MyBrokenInt()], type=pa.int64()) ---------------------------------------------------------------------------ArrowInvalidTraceback (mostrecentcalllast)
<ipython-input-12-1cf156b165b3>in<module>---->1pa.array([MyBrokenInt()], type=pa.int64())
~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib.array()
269else:
270# ConvertPySequence does strict conversion if type is explicitly passed-->271return_sequence_to_array(obj, mask, size, type, pool, c_from_pandas)
272273~/git_repo/arrow/python/pyarrow/array.pxiinpyarrow.lib._sequence_to_array()
3839withnogil:
--->40check_status(ConvertPySequence(sequence, mask, options, &out))
4142ifout.get().num_chunks() ==1:
~/git_repo/arrow/python/pyarrow/error.pxiinpyarrow.lib.check_status()
8283ifstatus.IsInvalid():
--->84raiseArrowInvalid(message)
85elifstatus.IsIOError():
86# Note: OSError constructor isArrowInvalid: Couldnotconvert<__main__.MyBrokenIntobjectat0x7fc331394290>withtypeMyBrokenInt: triedtoconverttoint

but this is the same message as what we get on master for

In [11]: classMyBrokenInt: ...: def__init__(self): ...: 1/1

so maybe it's ok?

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I think that is fine, personally

@arw2019
arw2019 marked this pull request as ready for review August 25, 2020 18:22
@arw2019
arw2019force-pushed the ARROW-7663 branch 2 times, most recently from 9a73767 to 21166d3CompareAugust 26, 2020 05:06

@jorisvandenbosschejorisvandenbossche left a comment

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Thanks for working on this!

Comment threadpython/pyarrow/tests/test_pandas.py Outdated
Comment threadpython/pyarrow/tests/test_compute.py Outdated

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What did the error message say before, and what does it show now?

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On master it's

TypeError: anintegerisrequired (gottypepyarrow.lib.Int8Array)

verus on this branch

ArrowInvalid: Couldnotconvert [
5
] withtypepyarrow.lib.Int8Array: triedtoconverttoint

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Hmm, for this case I find the original error message clearer ..

That's the consequence of the scalar(..) conversion using the array conversion under the hood, I suppose?
But OK, I suppose this is fine (it's maybe mainly the multiline repr of the array in the middle of the sentence that makes it more confusing)

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I think that is fine, personally

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What are the cases that this couldn't be converted, but that objis an integer? When the integer is too big to fit in a C int?

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Yes, and also when converting a negative integer to a uint:

pa.scalar(-1, type='uint8')

No other tests are touched if I recompile without this check

@arw2019
arw2019force-pushed the ARROW-7663 branch 3 times, most recently from 716bd51 to 0735885CompareAugust 31, 2020 18:53
@emkornfield

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@jorisvandenbossche was there more to be done here?

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Thanks for the ping. I think all good. @arw2019 can you just rebase to ensure it's still all passing with latest master?

@arw2019

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@jorisvandenbossche Rebased and seeing some failures. They're ones also popping up in other, unrelated, PRs, so not sure they're to do with this patch? I'm happy to investigate, though

@jorisvandenbossche

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There are some known failures on Mac and Appveyor at the moment, so nothing to worry about for this PR.

@jorisvandenbossche

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Thanks @arw2019 !

@arw2019

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Thanks @jorisvandenbossche for reviewing!

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