Barrick Lab

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1. breseqbreseqPublic

   breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It is intended for haploid microbial genomes (<20 Mb). breseq …

   GDScript 210 24

2. LTEE-EcoliLTEE-EcoliPublic

   Genomics resources for the Long-Term Evolution Experiment with E. coli

   GAP 20 5

3. ostirostirPublic

   Software for predicting translation initiation rates in bacteria

   Python 34 9

4. pLannotatepLannotatePublic

   Forked from mmcguffi/pLannotate

   Webserver and command line tool for annotating engineered plasmids

   Python 17 4

5. brefitobrefitoPublic

   Snakemake pipelines for analyzing resequenced bacterial genomes

   Python 4 1

6. seabreezeseabreezePublic

   seabreeze: A Pipeline for Analyzing Structural Variation Between Bacterial Genome Assemblies

   Python 6 2