QCs, figures and analyses after differential expression with DESeq2 or other similar tool.
Pantano L (2017). DEGreport: Report of DEG analysis. R package version 1.13.8.
DOI: 10.18129/B9.bioc.DEGreport
This is an R package.
Bioconductor stable version
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("DEGreport")Bioconductor latest version
devtools::install_git("https://git@git.bioconductor.org/packages/DEGreport")devtools unstable version
install.packages("devtools")
devtools::install_github("lpantano/DEGreport")Load the package and learn what to do:
browseVignettes("DEGreport")
Here is the last devel vignette.