Allow configuration of default properties of blosc compressor. - #42

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Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
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pedson:blosc-multithread-read

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@pedson

@pedsonpedson commented Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.

This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);

This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.

I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.

@SabineEmbacher

SabineEmbacher commented Apr 24, 2023

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@pedson

Dear Patric,
for the time being, we have stopped further maintenance of the library.
The people at zarr-developers plan to take over further development on Java.
Please contact @joshmoore for this.
Best Regards
Sabine

This was referenced May 22, 2023
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Re-opened as zarr-developers#6

@sanketverma1704

sanketverma1704 commented Jun 20, 2023•
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Hi everyone! 👋🏻

I've posted an update. Please see my comment → #41 (comment).

Thank you @pedson, @joshmoore and @SabineEmbacher.

Best,
Sanket Verma
Zarr Community Manager

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

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Allow configuration of default properties of blosc compressor. - #42
Open
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
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@pedson
@pedsonpedson
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Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
 Merged

 Closed

@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
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@joshmoore
joshmoore
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Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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4 participants

@pedson@SabineEmbacher@joshmoore@sanketverma1704

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
Allow configuration of default properties of blosc compressor. - #42
Open
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
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@pedson
@pedsonpedson
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Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
 Merged

 Closed

@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
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@joshmoore
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Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

edited

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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@pedson@SabineEmbacher@joshmoore@sanketverma1704

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
Allow configuration of default properties of blosc compressor. - #42
Open
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Conversation
@pedson
@pedsonpedson
commented
Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
 Merged

 Closed

@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
 Merged

@joshmoore
joshmoore
commented
Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

edited

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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4 participants

@pedson@SabineEmbacher@joshmoore@sanketverma1704

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

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Allow configuration of default properties of blosc compressor. - #42
Open
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
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@pedson
@pedsonpedson
commented
Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
 Merged

 Closed

@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
 Merged

@joshmoore
joshmoore
commented
Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

edited

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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4 participants

@pedson@SabineEmbacher@joshmoore@sanketverma1704

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
Allow configuration of default properties of blosc compressor. - #42
Open
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Conversation
@pedson
@pedsonpedson
commented
Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
 Merged

 Closed

@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
 Merged

@joshmoore
joshmoore
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Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

edited

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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4 participants

@pedson@SabineEmbacher@joshmoore@sanketverma1704

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
Allow configuration of default properties of blosc compressor. - #42
Open
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Conversation
@pedson
@pedsonpedson
commented
Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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Collaborator
@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
 Merged

 Closed

@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
 Merged

@joshmoore
joshmoore
commented
Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

edited

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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4 participants

@pedson@SabineEmbacher@joshmoore@sanketverma1704

, 'i');
if (__m === '*' || __re.test(location.href)) {
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})();
})();

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Allow configuration of default properties of blosc compressor. - #42
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pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
Open
Allow configuration of default properties of blosc compressor.#42
pedson wants to merge 3 commits into
bcdev:masterfrom 
pedson:blosc-multithread-read
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@pedson
@pedsonpedson
commented
Apr 21, 2023

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The goal of this PR is to allow the user to set the number of threads used for blosc decompression on the auto-created Compressor objects during read operations.
This is done via CompressorFactory.BloscCompressor.defaultProperties.put("nthreads", 8);
This was the least invasive/modifying approach I could find (in conjunction with PR #41 for user defined compressor objects). However, it does expose the actual BloscCompressor class and the implementation of the map. I'd be happy to implement something more extensive keeps the class implementation private if the maintainers prefer.
I also only updated the nthreads property to pull from the defaultProperties map rather than the default constants. If this approach is acceptable, I can change the other properties to have the same behavior.
@SabineEmbacher
SabineEmbacher
commented
Apr 24, 2023

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@pedson
Dear Patric,

for the time being, we have stopped further maintenance of the library.

The people at zarr-developers plan to take over further development on Java.

Please contact @joshmoore for this.

Best Regards

Sabine

This was referenced May 22, 2023
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@joshmoorejoshmoore
mentioned this pull request
Jun 14, 2023
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@joshmoore
joshmoore
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Jun 14, 2023

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Re-opened as zarr-developers#6
@sanketverma1704
sanketverma1704
commented
Jun 20, 2023•

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Hi everyone! 👋🏻
I've posted an update. Please see my comment → #41 (comment).
Thank you @pedson, @joshmoore and @SabineEmbacher.
Best,

Sanket Verma

Zarr Community Manager
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4 participants

@pedson@SabineEmbacher@joshmoore@sanketverma1704