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Berens Lab @ University of Tübingen

Department of Data Science at the Hertie Institute for AI in Brain Health, University of Tübingen

104 followers
Tübingen, Germany
https://hertie.ai/data-science
philipp.berens@uni-tuebingen.de

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Showing 10 of 98 repositories

retinal-rl Public
Testing theories about retinal coding in reinforcement learning environments
berenslab/retinal-rl's past year of commit activity
Python 1AGPL-3.0 1 31 4 Updated Sep 3, 2026
fundus_image_toolbox Public
A Python package for fundus image processing.
berenslab/fundus_image_toolbox's past year of commit activity
Jupyter Notebook 27MIT 6 0 2 Updated Sep 1, 2026
MorphoPy Public
A Python package for feature extraction of neural morphologies
berenslab/MorphoPy's past year of commit activity
Python 48MIT 11 0 0 Updated Aug 19, 2026
pygridfit Public
Python port of gridfit (John D'Errico, 2006), with some improvement.
berenslab/pygridfit's past year of commit activity
Python 0GPL-3.0 1 0 0 Updated Aug 18, 2026
RFEst Public
A Python 3 toolbox for neural receptive field estimation using splines and Gaussian priors.
berenslab/RFEst's past year of commit activity
Python 27GPL-3.0 4 4 (1 issue needs help) 0 Updated Aug 18, 2026
pywarper Public
Conformal mapping-based warping of retinal meshes and skeletons.
berenslab/pywarper's past year of commit activity
Python 1GPL-3.0 1 0 0 Updated Aug 14, 2026
pubmed-ophtha Public
berenslab/pubmed-ophtha's past year of commit activity
Python 2MIT 0 0 0 Updated Aug 13, 2026
skeliner Public
A lightweight neuromorphological mesh skeletonizer.
berenslab/skeliner's past year of commit activity
Python 6GPL-3.0 3 0 0 Updated Aug 11, 2026
interpretable_FM Public
Dual-IFM: an interpretable foundation model for retinal images.
berenslab/interpretable_FM's past year of commit activity
Python 1MIT 0 1 0 Updated Aug 10, 2026
cell_mosaics Public
Package to compute and plot cell mosaics and coverage.
berenslab/cell_mosaics's past year of commit activity
Jupyter Notebook 1MIT 1 0 0 Updated Aug 6, 2026

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